| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0945 |
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| Symbol | |
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| ID | 6331016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 982098 |
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| End bp | 983213 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657236 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001931122 |
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| Protein GI | 188996871 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000185962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACA TCAAAGATTT AGAAAGTTAT ATGAAAATTG CTTTAGATTT GGCAAAAATT
AGAAAAGGAT TAACCCATCC TAACCCAACC GTTGGAGCTG TTATTGTAAA AGATGGAAAA
ATAATAGGTA AAGGCTATCA TACCAAAGCA GGCATGCCCC ATGCAGAAAG AGAAGCAATA
AAAGACGCAA AAGAAAAAGG ATATGATTTA AAAGGTTCTA CTATGTTTGT AACCCTTGAA
CCATGCTGTC ATTATGGAAG GACGCCCCCC TGCACAAACG CAATCATTGA AGAGGGTATC
TCAGAGATTG TAATCGGAGT ATTAGACCAA AATCCGGTAG TAAAAGGTCA AGGAGTAAAT
ATACTAAAAT CTCATGGTAT TAAAGTAATT ACAGGTGTTT TAGAAAAAGA ATGCGAGAAG
ATAAATGAAG ATTTTTTTAC ATACATAAAA GAAAAAAGAC CATTTGTCCA TCTAAAAGTA
GCTCAAAGCT TTGATGGAAA AATAGCCACA AAAACAGGTG ATTCTAAATG GATAACATCT
GAAAAATCAA GACAATTTGC CCATCAGCTA AGAAAAGAAG CATCAGCCAT TCTCGTTGGC
ACAAATACAG CTTTAAAAGA TAATCCAGCC TTAACAGTTA GACACGTAGA AACAGAAAAA
CAACCAGTAA GAATTTTGAT AGACAAAAGA TTAAAAGTCC CGCCAACTTA TAACATTTAT
AACAATGAAG CTAAAACCAT TGTGATAACT TCTAAATTAG CCAGTCAAGA AAATCTTAAA
AGATTATCAG AAAAAGAAAA TGTTGAAATT GTGTTTTTAG ATTTAGATGA AAATGAGAAT
TTTAAGATTG ATGATATTCT TAAAACGCTA TACGCGAGAG AAATAGTTCA TCTTTTGGTT
GAAGGTGGTA GAGGAGTAAT AACAGACTTA ATAAAAGAAA GAAAGTTTGA TAAAATCTCA
ATTTTTACAG CACCTATATT GATAGGTGAT GATGGAATCT CTTGGCTTGG CTATCTTGGA
ATTGAAAAAA TTCAAGACAG CTTAAAGCTC AAGGTTGAAG ATTTTAAGGT TTTAGACAAG
GATTTTTATT TTGAGTGTTA TCCAGTAAGC TTTTAA
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| Protein sequence | MTNIKDLESY MKIALDLAKI RKGLTHPNPT VGAVIVKDGK IIGKGYHTKA GMPHAEREAI
KDAKEKGYDL KGSTMFVTLE PCCHYGRTPP CTNAIIEEGI SEIVIGVLDQ NPVVKGQGVN
ILKSHGIKVI TGVLEKECEK INEDFFTYIK EKRPFVHLKV AQSFDGKIAT KTGDSKWITS
EKSRQFAHQL RKEASAILVG TNTALKDNPA LTVRHVETEK QPVRILIDKR LKVPPTYNIY
NNEAKTIVIT SKLASQENLK RLSEKENVEI VFLDLDENEN FKIDDILKTL YAREIVHLLV
EGGRGVITDL IKERKFDKIS IFTAPILIGD DGISWLGYLG IEKIQDSLKL KVEDFKVLDK
DFYFECYPVS F
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