| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0934 |
|---|
| Symbol | |
|---|
| ID | 6332053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 970233 |
|---|
| End bp | 971192 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657229 |
|---|
| Product | permease |
|---|
| Protein accession | YP_001931115 |
|---|
| Protein GI | 188996864 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0701] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00064116 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA TTTACGACAG CATAGCTAAT TTTATAACAA AAAACATTTT AAATCTAAGT
GATAAATCAT ACGAAGTAGC ACACTTTTTT ATTTATGATA CTTTAAAAAT CTTTACACTT
TTAACGCTAA TAATCTTTGT AGTATCTTTT ATCAGAAGTT ATTTTCCACT TGAAAAAACA
AGGAAGATTT TATCTAAGCA TAAAGCTATT GCAATTCCAT TGGCTGCCAT TCTTGGTATT
TTTACACCTT TTTGTTCTTG TTCTGCTGTT CCAATGTTTA TTGGGTTTGT AGAAGCAGGA
ATTCCGCTTG GAGCTGCGTT TGCGTTTTTA GTATCTTCTC CAATGGTTAA TGAAGTTGCA
CTTGGATTGT TGTTTGCATC TTTTGGTTTT CAAGTTGCTT TGGCTTATGT TGTGTTTGGT
GTAGCAGTTG CTATAATAAG CGGGTTTTTT ATTGAAAAAT TAAACCCAAG ACATCTTATA
GAAGATTATG TTTTTGAACT TTCTTTTGGA GAAACAGAAG AAAAACCGAT GACTTTTAAA
GAAAGGATAG AGTTTGCAAA AAATAATGTA AAAGATATTC TAAGAAAAAT CTCAATTTAC
ATAATCGTTG CAATAGGAAT AGGTAGCTTT ATCCATGGAT ATGTACCAGA AGAAGCAATA
AAAAGCATTA TGAATTCAGC CGGGTTTTTA TCTGTGCCAT TAGCTGTAAT CATAGGCGTT
CCTCTATATT CTAACTCTGC CGGTATTTTG CCGGTTATTC AAGCATTAAT AGATAAAGGT
GTGCCAATAG GTACTGCATT AGCCTTTATG ATGGCTACCA CAGCTTTATC ATTTCCAGAA
TTTGTAATCT TAAAACAGAT AATGAAGCCA AAACTTATTG CTATATTTGC AGGCATTGTT
TCTGTATCCA TCATTATAGC CGGATATTTA TTTAATATCA TATTTGGGGG TTTAAGATGA
|
|---|
| Protein sequence | MFEIYDSIAN FITKNILNLS DKSYEVAHFF IYDTLKIFTL LTLIIFVVSF IRSYFPLEKT
RKILSKHKAI AIPLAAILGI FTPFCSCSAV PMFIGFVEAG IPLGAAFAFL VSSPMVNEVA
LGLLFASFGF QVALAYVVFG VAVAIISGFF IEKLNPRHLI EDYVFELSFG ETEEKPMTFK
ERIEFAKNNV KDILRKISIY IIVAIGIGSF IHGYVPEEAI KSIMNSAGFL SVPLAVIIGV
PLYSNSAGIL PVIQALIDKG VPIGTALAFM MATTALSFPE FVILKQIMKP KLIAIFAGIV
SVSIIIAGYL FNIIFGGLR
|
|---|
| |