Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0856 |
Symbol | |
ID | 6332270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 894724 |
End bp | 895422 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642657147 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_001931038 |
Protein GI | 188996787 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT TATATGAAGG AAAAGCAAAG ATAGTATATC AATCTGAAAG TCCAAATCAT GTTATCATCT ACTTTAAAGA TGAAGCAACA GCTTTTAACG CTCAAAAGAA AGATGTAATT GAAGGAAAAG GGATTTTAAA TAATAAAATA TCATCAATCT TTTTTACGCT TTTAAATCAA GCAGGAGTTA AGACGCATTT TATAAAACAG ATTTCAGACA GAGAAATGCT TGCATACAAA ACAAAAATCA TTCCGATAGA AGTGGTAGTC AGAAACTTAG CAACGGGAAG CATTGTTAAA AGGCTTGGAA TTCCGGAAAA GACAGAATTT AATCCACCGT TGATAGAGTT TTACTATAAA AACGATGCAC TTGGAGACCC AATCATATGC TATGAACATG TTTTAGTTAT GAAACTTGCA ACAGAAGAAG ACGTTAAAAC TATCAAAGAA ATGGCATTAA AAGTTAATCA AATATTAAGA GATTTTCTTA TAAAGCATGA CATTATTCTG GTTGATTTTA AGTTAGAGTT TGGAAAGTTA TATGATGGAA CAATCGTTGT AGCAGATGAG ATATCTCCGG ATACATGCAG ATTTTGGGAT GCAAAAACCG GTGAAAGAAT GGACAAAGAT AGATTTAGAC TTAATTTAGG AGATTTGGCT AAATTTTATC AAGAAGTTCT AGAAAGGATA GAAAAATGA
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Protein sequence | MEKLYEGKAK IVYQSESPNH VIIYFKDEAT AFNAQKKDVI EGKGILNNKI SSIFFTLLNQ AGVKTHFIKQ ISDREMLAYK TKIIPIEVVV RNLATGSIVK RLGIPEKTEF NPPLIEFYYK NDALGDPIIC YEHVLVMKLA TEEDVKTIKE MALKVNQILR DFLIKHDIIL VDFKLEFGKL YDGTIVVADE ISPDTCRFWD AKTGERMDKD RFRLNLGDLA KFYQEVLERI EK
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