Gene SYO3AOP1_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0828 
Symbol 
ID6332277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp867149 
End bp867871 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content33% 
IMG OID642657124 
ProductNLP/P60 protein 
Protein accessionYP_001931015 
Protein GI188996764 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.98283e-15 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAT CCAAGAAAAT TATAGGTACG TTTTTAAGTT TGTCAATTTT TATTCTACCA 
AATATAGCAG AAGCTAAAAC TAAAGGTCAT TCAAGTAAAA AAGCAAACCA TCATGCAACA
AAAGTATCTA AAAAATCAAG CCATGCAAAA AAAAGCCATA AACATATAAA GATAACTAAG
GTTTCTTACT CTTACGGTCC AAGAGTGTAT GGTGATTACC TTGAGCCTAA TAGGGATATT
TACAAGTATG CAGTAGGATT ACTTGGTACA AAGTACACTT TTGGCGGAAA CTCTATAAAC
GGGATAGATT GTTCATCTTT TGTTCAACAC GTTTTTGAGC TTGCAGGATT TAAACTTCCA
AGAACCGCAA GAGAACAAGC AAGATATGGA TATTTTGTTA GAAGAGAAAG CTTAAAACCG
GGAGACTTAT TATTCTTTGC AACTTATGCA AGCTTTCCTT CCCACGTAGG GATTTATATT
GGCGATGGTA AAATGATTCA TGCCTCTTCT AAAGGTGGAA GAGTTGAATT AGCAAATATT
AATGAAGATT ATTATGTGAG AAGATTTTTA TTTGCTAAAA GAATTCCGGC TAATATTAAA
GACTTGAAAG AAGTTGAAGA TATTGACTCT ATGGAGCAGT ATATGAACGA CAATACATCT
GAAAAGAGTA AAGAAAACGA CCCAATAGCA AAGATAATAC AGGAAAAGAA TGGAAAAAAT
TAA
 
Protein sequence
MKLSKKIIGT FLSLSIFILP NIAEAKTKGH SSKKANHHAT KVSKKSSHAK KSHKHIKITK 
VSYSYGPRVY GDYLEPNRDI YKYAVGLLGT KYTFGGNSIN GIDCSSFVQH VFELAGFKLP
RTAREQARYG YFVRRESLKP GDLLFFATYA SFPSHVGIYI GDGKMIHASS KGGRVELANI
NEDYYVRRFL FAKRIPANIK DLKEVEDIDS MEQYMNDNTS EKSKENDPIA KIIQEKNGKN