| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0794 |
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| Symbol | dapD |
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| ID | 6332223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 832349 |
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| End bp | 833164 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642657090 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001930981 |
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| Protein GI | 188996730 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGAAC TTAAAAAACT TATTTTAGAA GCATGGGAAA ACAGAGAGTT TTTAAAAGAA
AATAAATACA AAGAAGCAGT AAGAGAAACC ATTGACTTAT TAGACAATGG AAAAATAAGA
GTAGCAGAGA AGATAAATGG CGAATGGATA GTCAATGAAT GGATAAAGCA AGCTATTTTA
TTATACTTTC CTATTCAAGA GATGCAGGTT ATGGAAGTTG GACCTTTTGA ATATTACGAT
AAAATTCCTT TAAAGAAAAA TTATAAAGAA AGAGGCGTTA GAGTTGTTCC GCCAGCAACA
GCAAGATATG GAAGTTATAT AGAGCCGGGA GCGATTCTTA TGCCATCTTA TGTAAATATT
GGTGCTTACG TTGGAAGCGG AACAATGGTT GATACATGGG CAACGGTTGG TTCTTGTGCC
CAAGTTGGAA AAAACGTTCA CCTTTCAGGT GGAGTAGGTT TAGGTGGAGT CTTAGAACCA
CCTTCAGCAA GACCTGTAAT AATAGAAGAT AACTGCTTTA TAGGTTCCAG ATGTATTATC
GTAGAAGGTG TAATAGTAGA AGAAGAGGCT GTTTTAGGAG CTAACGTTGT AATAACAGCT
TCTACAAGAA TTATAGACGT TTCTGGTGAT GAACCTGTAG AGTACAGAGG AAGAGTTCCT
GCAAGAAGCG TTGTAGTGCC AGGAACAATC ACGAAGAAAT TCCCGGCTGG TGAGTATGGC
GTACAATGTG CTTTAATTAT CGGAAAAAGA AAAGAGTCAA CAGATAAAAA AACTTCTTTA
AACGATGCGT TGAGAGAGTT TAACGTTTCT GTTTAG
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| Protein sequence | MEELKKLILE AWENREFLKE NKYKEAVRET IDLLDNGKIR VAEKINGEWI VNEWIKQAIL
LYFPIQEMQV MEVGPFEYYD KIPLKKNYKE RGVRVVPPAT ARYGSYIEPG AILMPSYVNI
GAYVGSGTMV DTWATVGSCA QVGKNVHLSG GVGLGGVLEP PSARPVIIED NCFIGSRCII
VEGVIVEEEA VLGANVVITA STRIIDVSGD EPVEYRGRVP ARSVVVPGTI TKKFPAGEYG
VQCALIIGKR KESTDKKTSL NDALREFNVS V
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