Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0789 |
Symbol | |
ID | 6332684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 827214 |
End bp | 828122 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642657084 |
Product | transposase IS4 family protein |
Protein accession | YP_001930976 |
Protein GI | 188996725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000017402 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA CAGGAATATC CTTTAAACAA ATCTATAAAC TTACAAAAAG ATTTTTTAAA AAGATTAAAC ATAAGGAAAA GAAAAATAGT CAAAGAGGTA GACCAAGAAA GTACAAAGAT GAGTTCATAA TAGCTATATT TCTATACCAA ACACTAAAAC AATATTCTTA TAGAGAAGTT CTTCAAGAGC TTAAATATTT TGGCTTTAAA ACCCCTTCTC TAAATGACTA TCATTATAGG ATTAAACAAT TTAATAAAAA CACTTTAAAA TTATTGCTGG AAAAAACAGG ACAGTATTTT ATTGAAAAAA TCAAAGATGA AATACAGTGC TACATAGCAG ATGCTACAGG TTTTGCCTAT GGAGATATTT ATAGCCTTAA ATGGAGAAGA GGGATAGAGG TAAAACAGAT AAAATCCCAT ATAAGACTTG AGGTTATTAT GGCAGTAGAT AACGAAGATA AAGTGGTAAT TTTGGGATGT GAAACAGGTA AAGCCTATGC AAGTGAGATA AAGATGTTAA ATCAGATATT AGACAAAGTA GATTTTATCA AAGGACTACC TTTTATAGCT GATAAAGGTT ATGATTCAAT AAGTGTAATA CAAAAAATCT TAGACATTGG ACTTATTCCT GCTATAAAGA TAAAGGAAAC ATTTAGAATA AAAATAAAGC ATCCATTGAG ACAGTTATCA AAGGAAAATT GGTTAAAGTA TGGAAAGAAA AGATATAGAA TAGAATCTTT ATTTGGTAAT ATAAAGAACA AAGCAAATTC AGTGTTTAGA GTTAAAAGAG AAGATATAGC TAAGAAGTTA GCTATTGCTT GGGCTATTCT TTGGAATTTC TACATGATTT TAATTTATGT ATTTTTGTTT ATCCTATCAG TCTTAATTTT TAGAAGAAGT TTTTTTTGA
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Protein sequence | MRKTGISFKQ IYKLTKRFFK KIKHKEKKNS QRGRPRKYKD EFIIAIFLYQ TLKQYSYREV LQELKYFGFK TPSLNDYHYR IKQFNKNTLK LLLEKTGQYF IEKIKDEIQC YIADATGFAY GDIYSLKWRR GIEVKQIKSH IRLEVIMAVD NEDKVVILGC ETGKAYASEI KMLNQILDKV DFIKGLPFIA DKGYDSISVI QKILDIGLIP AIKIKETFRI KIKHPLRQLS KENWLKYGKK RYRIESLFGN IKNKANSVFR VKREDIAKKL AIAWAILWNF YMILIYVFLF ILSVLIFRRS FF
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