Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0753 |
Symbol | |
ID | 6331669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 782177 |
End bp | 783964 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642657043 |
Product | GTP-binding protein LepA |
Protein accession | YP_001930940 |
Protein GI | 188996689 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCGAGA GAATGGAAAA AATCAGAAAC TTTTCTATAA TAGCCCATGT AGACCATGGA AAATCAACCT TAGCAGATAG ACTTATTGAG TTTACAGGTG GGTTAGAAAA AAGAGAAATG AAAGAACAGC TTTTAGACAC TCTTGACATA GAAAGAGAAA GAGGAATTAC TATAAAACTC CAAGCAGTTA GATTAAAGTA TAAAGATTAT ACACTACATT TAATAGATAC ACCCGGACAC GTAGACTTTG GATATGAAGT GTCAAGGTCA TTAGCAGCAT GCGAAGGGGC ATTATTACTC ATAGATGCAA CGCAAGGAAT AGAAGCTCAA ACCATAGCTA CATTTTGGCA AGCATTAAAC CTAAACCTTG AAATAATACC GGTCATAAAC AAAATAGACC TTCCATCTGC CGATGTAGAA AGGATAAAAA CGCAGATTGC AGAAGTTTTA GGACTTGACC CAGAAGGAGC AATTTTAGCA TCAGGGAAAG CAGGCATAGG AATAGAAGAT ATATTAGAAG CAATAGTAAA AAGAATCCCG CCACCAAAAG GCGATGAAAA CAAACCATTA AAAGCTTTAA TCTTTGATTC TTACTACGAC CCATACAGAG GAGCTGTAGC ATTCATAAGA GTTATTGATG GAGAAGTTAA AGTAGGAACA AGAATTAGAT TAATGTCAAC AGGAAAAGAG TTTGAAGTTA CAGAGGTTGG AGCACAAACA CCAAAGATGA CAAAGCTTGA TAGCCTAAAA GCCGGAGATG TTGGCTACGT TGCAGCAGCT ATCAAGGACG TTAGAGATAT CAGAGTTGGA GATACTATAA CAGATGCAAA AAGACCAACA GATAAACCAG TCGAGGGATT TAGACCGGCA AAACCTATGG TATACGCTGG ATTGTACCCA ACCGGAAACA CAACCTTTGA AGATATGAGA GATGCGCTGG AAAGATACTC TATAAATGAC TCAGCATTAA CCTACGAAGT AGAATCATCT CCAGCCCTTG GAATGGGGTT TAGATGTGGA TTTTTAGGTC TGCTTCATCT TGAAATAGTT CAAGAAAGGC TTGAAAGAGA GTATGGTATA GAGCTAATCA CAACTGCACC AAACGTTATT TATAAAGTAA TCACAACAAA AGGAGAGGAG GTAGAAGTAA GAAATCCATC TCAACTTCCA AATCCAAATG AAATAGACAA AATTTTAGAG CCATACATAG AAGCAAGCAT CATTACACCA AATGAGTATG TTGGTTCAAT CATGCAACTT GTACAAGAAA AAAGAGGAAT TCAAAAAGGT TTTGAATACA TAGACCAAAA AACCGTTTTA CTTAGATATG AAATTCCACT TGGAGAGGTT TTATTTGATT TCCACGATAA ACTAAAAACA GTTTCAAGAG GCTATGCATC TTTTGACTAT GAATTTATAG GCTACAGAGA AGGTGATTTA GTCAAAATGG ACATTCTCAT CAACGGTGAG CCGGTAGATG CTTTGTCATT CATAGTTCAT AGAGATAAGG CATATAGGGT AGGAAGAAAT TTAGTTGATA AAATGAAAGA AGTTATCCCA AGACAACTTT TTGAAGTAAA AATACAGGCA GCAATAGGAT CAAAAATCAT CGCATCAAAT AGAGTAGCAC CACTTAGAAG TGATGTATTG GCAAAATGCT ATGGTGGAGA CATTACAAGA AAGAGAAAGC TTCTTGAAAA ACAAAAAGAG GGTAAAAAAA GAATGAAACA GTTTGGCAAA GTAGAACTTC CACAAGAGGC ATTTTTAAGC ATACTAAAAG CAGATTGA
|
Protein sequence | MSERMEKIRN FSIIAHVDHG KSTLADRLIE FTGGLEKREM KEQLLDTLDI ERERGITIKL QAVRLKYKDY TLHLIDTPGH VDFGYEVSRS LAACEGALLL IDATQGIEAQ TIATFWQALN LNLEIIPVIN KIDLPSADVE RIKTQIAEVL GLDPEGAILA SGKAGIGIED ILEAIVKRIP PPKGDENKPL KALIFDSYYD PYRGAVAFIR VIDGEVKVGT RIRLMSTGKE FEVTEVGAQT PKMTKLDSLK AGDVGYVAAA IKDVRDIRVG DTITDAKRPT DKPVEGFRPA KPMVYAGLYP TGNTTFEDMR DALERYSIND SALTYEVESS PALGMGFRCG FLGLLHLEIV QERLEREYGI ELITTAPNVI YKVITTKGEE VEVRNPSQLP NPNEIDKILE PYIEASIITP NEYVGSIMQL VQEKRGIQKG FEYIDQKTVL LRYEIPLGEV LFDFHDKLKT VSRGYASFDY EFIGYREGDL VKMDILINGE PVDALSFIVH RDKAYRVGRN LVDKMKEVIP RQLFEVKIQA AIGSKIIASN RVAPLRSDVL AKCYGGDITR KRKLLEKQKE GKKRMKQFGK VELPQEAFLS ILKAD
|
| |