Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0694 |
Symbol | |
ID | 6332158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 712505 |
End bp | 714745 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656982 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001930884 |
Protein GI | 188996633 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00369778 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGG CAACTATTGT TTGGACAAAG ATTGACGAAG CACCGGCTCT TGCAACTTAT TCTTTACTAC CAATCATGAG AGCTTTTACA AAAGGTGCAG ACGTTGAAAT TGAGTTAAGA GATATTTCTT TATCAGGAAG AGTTATAGCG TTATTCCCAG AGTATTTAAA AGAAGACCAA AGAATTCCAG ATGAGCTTTC TTATTTAGGA GAGCTCGTTT GGAAACCAGA AGCTAACATT ATGAAGCTTC CAAACATCTC TGCATCTGTT CCTCAGCTTA TAGCAACAAT AAAAGAATTA CAATCTCAAG GATACAACCT TCCAGATTTT CCAGAAGACC CAAAGACAGA AGAAGAGAAG GCAATTAGAG AAAGATATAT GAAAGCTGTT GGCTCTGTAG TAAACCCTGT TTTAAGACAA GGAAATTCAG ACAGAAGACT TTCTAAATCT GTTAAAGAAT ATGCTAAAAA ATTCCCACAT AAAATGAAAG CTGTTAGCCC TAACTCCAAG GCTCATGTAG CTCATATGTT AGGTGGAGAT TTTTATGAAA ACGAAAAATC AGTTACTATC AAAAAAGATA CAACAATAAG ATATGAATTT GTTAACAAAA ATGGAGAAGT TAAAGTATTA AAAGATGGTG TTAAGGTATC TGTTGGCGAT GTTGTAGATG GAACATTCTT AAGCAGAAGA AAGTTAAGAG ACTTTTATGA AAAAGTAATT GAAAGAACTA AAGAAGATGA TATTCTTTTC TCTTTACACT TAAAAGCAAC AATGATGAAA GTTTCTGACC CTGTAATGTT TGGGGATGCT ATAAGAGTTT ATTTTAAAGA ATTATTTGAA AAATTTGGAA AAGAGCTTGA AGAAATAGGG TTTAATCCAA ATAACGGTCT TGCAGATTTA GAAGCTAAAT TATCTAAGTT GCCAGAAGAT AAACAAGCTG CAATCAAGAA AACAATTGAA GAAATCTACC AAAAAAGACC AAGAATGTAT ATGGTAGATT CAGACAAAGG AATTACAAAC TTACACAGAC CAAACGACGT AATCGTTGAC GCATCCGTTC CAGCTGTTAT TAAAAATGGT TTACAAGGCT GGGGTCCAAA AGGTGAAGAA GATGACTGCG TAATCACAAT CCCAGATAGA AGCTATGCAA GAATGTATAA AGAAATAGTT GAAGATATTA AAACTAACGG GCAGTTTGAC CCTGCAACCA TTGGAAGCGT TGCAAACGTA GGTTTAATGG CAATGGGAGC TGAAGAGTAT GGTTCTCACG ACAAAACATT CTTCCCACCA GAAGATGGAA AAATCAGAAT CGTTGACGAA GAAGGCAATG TATTAATCGA ACATGAACTT GAAGCAGGAG ATATTTATAG AAGCTGTATC ACAAGAGATA TAGCAATCAG AGACTGGATA AAATTAGCTG TTAACAGGGC AAAAGAAAGC GGTGAGCCAA TAGTATTTTG GCTTGATAAA TACAGAGCTC ACGACAGAGA ACTTATAGAA AAAGTAAGAG AGGAGCTTCC AAAATACGAT TTATCCGATG TTGAGTGGTA CATCAAATCT CCAGAAGATG CTATGAAATT TACATTAAAA AGATTTAGAG CTGGTTTAAA TACTATTTCT GTAACCGGTA ACGTTTTAAG AGACTACTTG ACAGACCTAT TCCCAATCAT TGAGGTAGGT ACATCAGCAA GGTCTTTATC AATCGTTCCA TTGATTGCTG GCGGTGGTGT ATTTGAAACA GGTGCTGGTG GCTCTGCTCC TAAGCACGTA GAACAATTCT TAAAAGAAGG ACACTTAAGA TGGGATAGTC TTGGAGAGTT CCTCGCATTC GTTGAATCAT TAAAATTAGC TTACAAACAA TTAAAAACAT TGCATGGAAA GGATAATCCA AGAATATTGG TTCTTGCAGA AACCTTAGAT AAAGCAGTAC AAAAATATCT TGAAAATAAC AAAACACCGG GAAGAAAAGT TGGTCAGCTT GATAATAGAG GTTCTCACTT CTACCTTGCT ATGTATTGGG CAGAGGCTTT AGCTACTCAG GATAAAGACC CAGAATTGGC TAAGAAATTT GAAAAAGTAT TTGCCGACTT AAAAGAAAAT GAGCAAAAAA TCCTTCAAGA AATAGCAGAT TCTGAAGGTA AACCACAAGA CATAGGCGGA TACTACCATC CAGACGATGC AAAAGCTGAA AAAGCAATGA GACCAAGCGA AACATTCAAT AGAATAATAG ATTCTATATA A
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Protein sequence | MSKATIVWTK IDEAPALATY SLLPIMRAFT KGADVEIELR DISLSGRVIA LFPEYLKEDQ RIPDELSYLG ELVWKPEANI MKLPNISASV PQLIATIKEL QSQGYNLPDF PEDPKTEEEK AIRERYMKAV GSVVNPVLRQ GNSDRRLSKS VKEYAKKFPH KMKAVSPNSK AHVAHMLGGD FYENEKSVTI KKDTTIRYEF VNKNGEVKVL KDGVKVSVGD VVDGTFLSRR KLRDFYEKVI ERTKEDDILF SLHLKATMMK VSDPVMFGDA IRVYFKELFE KFGKELEEIG FNPNNGLADL EAKLSKLPED KQAAIKKTIE EIYQKRPRMY MVDSDKGITN LHRPNDVIVD ASVPAVIKNG LQGWGPKGEE DDCVITIPDR SYARMYKEIV EDIKTNGQFD PATIGSVANV GLMAMGAEEY GSHDKTFFPP EDGKIRIVDE EGNVLIEHEL EAGDIYRSCI TRDIAIRDWI KLAVNRAKES GEPIVFWLDK YRAHDRELIE KVREELPKYD LSDVEWYIKS PEDAMKFTLK RFRAGLNTIS VTGNVLRDYL TDLFPIIEVG TSARSLSIVP LIAGGGVFET GAGGSAPKHV EQFLKEGHLR WDSLGEFLAF VESLKLAYKQ LKTLHGKDNP RILVLAETLD KAVQKYLENN KTPGRKVGQL DNRGSHFYLA MYWAEALATQ DKDPELAKKF EKVFADLKEN EQKILQEIAD SEGKPQDIGG YYHPDDAKAE KAMRPSETFN RIIDSI
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