Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0623 |
Symbol | |
ID | 6332437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 640083 |
End bp | 640928 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642656909 |
Product | fumarate hydratase |
Protein accession | YP_001930814 |
Protein GI | 188996563 |
COG category | [C] Energy production and conversion |
COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000355042 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGAGAAA TACACGTTAA TGAAATCATA GATAAAGTTA AAAATCTTGT AATGGATAGT GAATACAAGC TTCCGGAGGA TTTTATTCAA GCAATAAAAA TAGCAAAAGA AAAAGAAGAA TCTCCACTTG GAAGAGAAAT ATTAGATGAA ATTTTAAAGA ATGCAGAAGT GGCAGAAAAA GAGCAAGTAG CTTATTGTCA AGATACTGGC TATCCTGTAT TTTTTGTGGA AGTTGGTCAA GATGTTAAGA TTGTTGGCGG AAGTTTGAGA GAAGCTATAA ATGAAGGTGT TAGAAGAGCT ACAAAAGAAG GATACTTAAG AGCATCTTTG GCTTACGACC CAATTTTTGA CAGAAAAAAC ACGGGAGATA ATACTCCAGC TTTGATATAC TTTGACATTG TGCCAGGAGA TAAAATAAAA ATCAAATTTG CTGCAAAAGG TGGCGGGTCT GAAAATCAAA GTAAACAAGC TATGTTAAAG CCGGCAGATG GATTAGAAGG AGTTAAAAAA TTTATTCTTC AATCTATAGC TAACGCAGGT CCAAACGCGT GTCCACCCTT TACAGTAGGC GTTGGCATAG GTGGAACTTT CGATTATTCT GCAGTGTTGG CTAAAAAATC TCTTTTTAGA CATATTGGAG AACGTCATCC AGACCCAAGA ATAGCAAAAT TAGAAGAAGA GCTTATAGAA CTTGCAAACC AGCTTGGGGT TGGACCACTT GGATTTGGTG GAACAACAAC GGTTGTGGAT GTAAAAATTG AAATCGCACC TTGCCATATT GCTTCTTTGC CAGTTGCTGT TAATATCCAA TGTCATGCAG CAAGACATAA AGAGATAGAA ATATAG
|
Protein sequence | MREIHVNEII DKVKNLVMDS EYKLPEDFIQ AIKIAKEKEE SPLGREILDE ILKNAEVAEK EQVAYCQDTG YPVFFVEVGQ DVKIVGGSLR EAINEGVRRA TKEGYLRASL AYDPIFDRKN TGDNTPALIY FDIVPGDKIK IKFAAKGGGS ENQSKQAMLK PADGLEGVKK FILQSIANAG PNACPPFTVG VGIGGTFDYS AVLAKKSLFR HIGERHPDPR IAKLEEELIE LANQLGVGPL GFGGTTTVVD VKIEIAPCHI ASLPVAVNIQ CHAARHKEIE I
|
| |