| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0616 |
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| Symbol | |
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| ID | 6331642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 631144 |
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| End bp | 633285 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642656902 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001930807 |
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| Protein GI | 188996556 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000184713 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT TAGATGCACC TGCAAAAGAG CTTTTAAATA AGATAGATTA TCTAAAACCA
GAAGAAAAAC AAGAAATAGA AAATGCTATT GATTATGTCA TTGAAAAGCA TAAAGACCAG
TATAGAAAAT CTGGAGAACC TTATTATATT CACCCAATAG AAGCAGCAAA AACCATAGCA
GATTTAAAAT TAGATAAAAC TTCTATAATT TCTACGCTTT TACATGATAT TGTTGAAGAC
ACGGATACTA CCCTTGAAGA GATAGAAGAA AAATTTGGTA AAAAGGTTGC TGAAATTGTT
GATGGTGTTA CAAAAATCGG AAAGTATCAG TTTGAAAATT TAGAAGATGC AAAGTATGAA
AATTTTAGAA AATTAATTAT ATCAACAGCA AAAGATATAA GAGTTATACT TGTTAAGCTT
GCAGATAGAC TTCATAATAT GAAGACACTT CAGCATTTAA GAGAAGATAA ACAAAAAAGA
ATCGCCAAAG AAACGCTTGA AATATATGCT CCAATAGCAA GCAGACTTGG TCTTTGGAAT
ATAAAAAGAG AATTAGAAGA CCTTGCGTTT ATGTATCTAT ATCCAGAAGA GTATAAAAAA
GTTGCTACAT ATTTTGCCCA TTCAAAAGAA AAGTATGAAA AATATCTCAC AGAAAAAGTA
ATACCGGTTC TTAAAGATGC TTTAAAGCAG CATGGAATAA AAGCAGAAAT ACAATACAGA
TATAAACACC TATACAGCAT ATATGAAAAA ACATTAAGAA AAAACCTTAA ATTAAGCGAT
GTTTATGATG TTTTTGGAGT TAGAGTTTTA GTTGAAGATG TAAAAGACTG TTATTTAGCC
TTAGGGGTCG TTCATTCAAT ATGGACGCCT GTACCGGGTA AATTTAAAGA TTATATCTCA
CTTCCAAAAT CTAACTTTTA TCAAGCACTT CATACAACTG CTGTAGGACC AGAAGGAAGA
TTTGTAGAGA TACAGATAAA AACTTTCCAA ATGCATAAAA TAGCAGAAGA GGGAATAGCT
GCTCACTGGA TTTATAAAGG TGGAAAAGAT TTAACAGAAA AAGATGCACA AACATTTGTT
TGGCTTAAAA ATCTGTTAGA AACATTAAAA GAAAATTCAA GTAGCGAAAT AATAAACGAT
ATTAGTAATG ACCTAATACT TGATGAAATT TATGTATTTA CACCAAAAGG CGATTTGATT
AAACTTCCAT CAGGTTCAAC TCCAGTAGAT TTTGCATATG CCATACATAC AAAGGTTGGT
CATAAAGCAG TTGGGGCTAA AGTAAATGGT AAATTAGTTC CACTTGATAC AAAGCTAAAA
AGTGGCGATG TTGTAGAAAT TATCACAAAA GAAGGACATA ATCCTTCAAG AGATTGGCTT
AATTTTGTAG TCACATCTAA AGCAAAAACA AACATAAAGC AATATATAGC AAAGATTGAG
AAAGAAAAGT CAATTAAGTT TGGAGAAAAG TTATTAGATA AATTTTTAAA GAAGATTAAT
AAAAAATTGA GCACATTAAC AGAAGAAGAA AGAAATAGAA TATTAAAAAA ATATAATTAT
AAAACCTTCG AAGACTTTTT AGCTGCTCTT GGTGATGGAA AAATCTCACC TGCAAAAGTG
ATTAGACTTT TAAGGGAAGA TAAAGAAGAT ACAGAAACAA AATCAGAAAC CAAAAAAACA
GCTTCGGATA TTACGATAGA AGTTGATGGA ATATCAAATA TTTTGTCTCA TTTATCAAAG
TGCTGTATGC CAGTCCCGGG TGATGAAATT TATGGCATAG TTTCAAAAGG AAAGGGTATT
GCTATTCATA GAAAAGAATG TCCTAATATA AAACCGGTTT TAGAATCAGA GCCTGAAAGA
ATCATCAATG TAGCTTGGGG TAAAAATATA AATCATCTAT ACAATTCTCA AATAAAAATA
TTTACTGAAG ATAAGCCCGG AATGCTTGCA AATGTTTCTA ATGCAGTAGC CAATGCAAAA
TCAAACATAT CAAATGCTCG TGTTCAAACT TTAAAATCTG GTAAGGCAAT CATAGATTTA
ACAATTCAAG TTAGAAATAA AGAGCATTTA AATGGAATTT TAAAATCTAT AAAGAATACG
CCAGGTGTGA TCTCTGTTAG TAGAGTTTTG AAAAAGGGTT GA
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| Protein sequence | MKTLDAPAKE LLNKIDYLKP EEKQEIENAI DYVIEKHKDQ YRKSGEPYYI HPIEAAKTIA
DLKLDKTSII STLLHDIVED TDTTLEEIEE KFGKKVAEIV DGVTKIGKYQ FENLEDAKYE
NFRKLIISTA KDIRVILVKL ADRLHNMKTL QHLREDKQKR IAKETLEIYA PIASRLGLWN
IKRELEDLAF MYLYPEEYKK VATYFAHSKE KYEKYLTEKV IPVLKDALKQ HGIKAEIQYR
YKHLYSIYEK TLRKNLKLSD VYDVFGVRVL VEDVKDCYLA LGVVHSIWTP VPGKFKDYIS
LPKSNFYQAL HTTAVGPEGR FVEIQIKTFQ MHKIAEEGIA AHWIYKGGKD LTEKDAQTFV
WLKNLLETLK ENSSSEIIND ISNDLILDEI YVFTPKGDLI KLPSGSTPVD FAYAIHTKVG
HKAVGAKVNG KLVPLDTKLK SGDVVEIITK EGHNPSRDWL NFVVTSKAKT NIKQYIAKIE
KEKSIKFGEK LLDKFLKKIN KKLSTLTEEE RNRILKKYNY KTFEDFLAAL GDGKISPAKV
IRLLREDKED TETKSETKKT ASDITIEVDG ISNILSHLSK CCMPVPGDEI YGIVSKGKGI
AIHRKECPNI KPVLESEPER IINVAWGKNI NHLYNSQIKI FTEDKPGMLA NVSNAVANAK
SNISNARVQT LKSGKAIIDL TIQVRNKEHL NGILKSIKNT PGVISVSRVL KKG
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