| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0500 |
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| Symbol | |
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| ID | 6332164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 514546 |
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| End bp | 516120 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656789 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001930695 |
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| Protein GI | 188996444 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCT TAAAATCTTT TGAGATAGCC AACGCTGACA AACGAACTAT TGAAATAACC
GGCATACCAT CTTTGGTGCT TATGGAAAGT GCCGGACGGT CTGCTGTCCA AATAATTTTA
CAGCATTATC CAAATTCAGA AAAAATAACA GTAGTGGCAG GCAGTGGAAA TAATGGCGGT
GATGCGGTAG TTGTAGCAAG ATACTTAGCA AAGCTTGGCA AAGAAGTATA TTTATTTATT
TTGGCAGAAA ATGAAAGCAA ACTTTCCCCT GATAATCTAA AAAATCTTGA AATCTTTAAA
AACTTTGGAT TTACATATCA GTTTATTACA GAAAAAAATC TTGATATTTT AGAAAAAAAT
CTTATTCAAA CTGATTTAAT CGTTGATGGA ATTTTTGGAA CAGGTTTTAA GCCACCTGTA
AAATCTTATA GAGAAAATGT TATAAAACTT ATAAATCAAA GTAAAAAGCC TGTTGTAAGT
ATTGATATAC CATCGGGTCT TAGTGCTGAT ACTGGCAACG TTGAAGGAGA AGTTATAAAA
GCAGATATAA CAATAGCCTT TGGCTATCCA AAAATCTGCC ATGTCTTATA CCCGGCATTG
CAGTACTGCG GAAAAGTGTA TGTTGCCGAT ATTAGCTTAA ATCCTGTATA CGCAGAAGTT
GAAAGATATC TCATCACACC GGAAAATCTT ACTTTGCCGG TTAGAGAAAA AACAGGTCAT
AAATACACCT TTGGTCATGT GTTGGTTGTT GGCGGTAGCG TTGGAAAATC AGGGGCTGTC
ATAATGGCGT GTAGGTCTGC TACAAAATCA GGAAGCGGTC TTACTACTGC AATAGTTCCA
GATTGTATAA ATCAAGTGTT GGAAACAAAT CTCATTGAAG AGATGAGTAT TCCGGTTAGG
TCTGAAAATG GAATGTTTGG TGAAAATCCA GAGAAGATTT TAGAAATCAT CCAGAATGGT
AAATTCTCTT CGGTTGTAGT TGGAATGGGA ATGGGTGTAT CTAAAACAAA TCAAGAGATT
GTAGAAAAAC TCTTAACCAT TGACAAACCT TTAATCATTG ATGCCGATGG AATAAATAAT
CTTGCTAATA TAGAAAATTT TAGAGAAAAG TTATCAAATA GAACAAACAT TACTGTACTG
ACACCACATA CAGGAGAGTT TTCAAGATTA ACAGGATTAT CAGTTAAAGA TATATCAGAA
AACTATGAAG AAATAGCAAA AGAGTTTGCA ATCAGCACAA AAAGCTATAT AGTTTTAAAG
TTTCATAGAA TGGTTATTTT TACACCGAAT GGTAAGATTT ATTACAGCAA TAAAGGAAAT
TCTGGAATGG CAACAGCCGG CAGCGGAGAT GTTTTAGCCG GAATGGTTGG AGCATTGATA
AACAGACTTA ACCCGGAAGA TGCTCTAAAG CTTGCTGTAT ACTTACACGG CTACGCAGGA
GATTTGGCAG TTAAAGACGT TGGAGAAGAA AGTCTAAAGG CAACAGACAT TATAGATTAC
ATTCCAAAAG CACTTAAAAA TTTAGCAGAG ATAAAATCAA ATCTAAAACA ATCTTTGATT
TATGAACTAT CATAG
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| Protein sequence | MKILKSFEIA NADKRTIEIT GIPSLVLMES AGRSAVQIIL QHYPNSEKIT VVAGSGNNGG
DAVVVARYLA KLGKEVYLFI LAENESKLSP DNLKNLEIFK NFGFTYQFIT EKNLDILEKN
LIQTDLIVDG IFGTGFKPPV KSYRENVIKL INQSKKPVVS IDIPSGLSAD TGNVEGEVIK
ADITIAFGYP KICHVLYPAL QYCGKVYVAD ISLNPVYAEV ERYLITPENL TLPVREKTGH
KYTFGHVLVV GGSVGKSGAV IMACRSATKS GSGLTTAIVP DCINQVLETN LIEEMSIPVR
SENGMFGENP EKILEIIQNG KFSSVVVGMG MGVSKTNQEI VEKLLTIDKP LIIDADGINN
LANIENFREK LSNRTNITVL TPHTGEFSRL TGLSVKDISE NYEEIAKEFA ISTKSYIVLK
FHRMVIFTPN GKIYYSNKGN SGMATAGSGD VLAGMVGALI NRLNPEDALK LAVYLHGYAG
DLAVKDVGEE SLKATDIIDY IPKALKNLAE IKSNLKQSLI YELS
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