Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0401 |
Symbol | |
ID | 6331977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 417544 |
End bp | 418482 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642656692 |
Product | DNA polymerase III delta' subunit |
Protein accession | YP_001930598 |
Protein GI | 188996347 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 84 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTTA TCGGACACGA GAAAGAAAAG ACACTGATTA AGAAATATTT ACATAAAAAT TATGACTCTT TATCTTTACT ATATGAGGGT AAAGACTGTA TTGGTAAAAA GTTATTGGCT TTATATACTG CTCGTGGTTT TTTATGTGAA AAGAAAGAAG GTTTTGGCTG TGGAGTATGT AATGATTGCA AGTTAGTCAA TAATTTAATT TCTAATGTTT ATGAAAACAC AAACCTAACA CCACATCCCA ATATAATGCT TATTCAATCT GACAACAGAG AGATAAAAAT AGACCAAATT AGAGAAGCTA TAAGCTTTCT TTCTTTAAAG TCTTCGAAAG GAAAGGTTTT AATCATAGAA AAGGCAGAAA ATTTAAATAC AGAAAGTGCA AATGCATTGC TAAAAACCTT GGAAGAACCA CCGTCAAACA CTTTAATCAT ACTTACAACT TCTAACCAAA ATCAGCTTCT TCCTACAATA GTTTCTAGGC TAAAAAAAAT TAGATTTAGA AAGTTGAGCC ATCAGGATGT GGTTGATATT TTAAGCCTAA AATTAAGTGA TGAAAAAAAG ATCAAAGAGC TTGCTGATAT ATCAGATGGA AGTTTATGTA TTGCTTCTAC GTTATTGAAA AAAGAGGAGA TTTATGTATG GGCTAAAGAT TTTGTTGGAA TTTTGATAAA CAAAAAACAT CCGGAAGGTA TATTTTCAAT CGCAGCTAAG ATAGACAAAA TGGATATAGA AGATGTAAAT CTTTTTTTTG ATATAATTTT CAAATTCTAC ATTAAGCATA GTAAAGATTT AAAAGATATT GATAGCTATC AAAAATTTTT AAATCAGTAT AGATTAGCTA TTACAAGTTT AAGAAAGGGT GTTAAGAAAA AATTGATTAT TGAAAGTTTT TATTTTAGAC TAACTCAAAA AGGAGCGTTG TATGAATAA
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Protein sequence | MKVIGHEKEK TLIKKYLHKN YDSLSLLYEG KDCIGKKLLA LYTARGFLCE KKEGFGCGVC NDCKLVNNLI SNVYENTNLT PHPNIMLIQS DNREIKIDQI REAISFLSLK SSKGKVLIIE KAENLNTESA NALLKTLEEP PSNTLIILTT SNQNQLLPTI VSRLKKIRFR KLSHQDVVDI LSLKLSDEKK IKELADISDG SLCIASTLLK KEEIYVWAKD FVGILINKKH PEGIFSIAAK IDKMDIEDVN LFFDIIFKFY IKHSKDLKDI DSYQKFLNQY RLAITSLRKG VKKKLIIESF YFRLTQKGAL YE
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