Gene SYO3AOP1_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0358 
Symbol 
ID6331713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp373491 
End bp375542 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content32% 
IMG OID642656649 
ProductDNA topoisomerase I 
Protein accessionYP_001930557 
Protein GI188996306 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.01729e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGAAA AGAAAATAGT TATTGTAGAA TCACCAAAAA AAGCAAAAGA GATATCACAC 
TTTTTAGGAA AAGATTTTAT TGTGAAAGCA ACAGTAGGGC ACTTTAAAGA CCTTCCAGAA
AATGAAATGG GAGTTGACTT AAACACATAT GAGCCAAAAT TTGTAATAAA ATCTCAAAAT
CATAAAAAAA TCTTATCAGA AATAAAAAAA TTGGCAGAAA AATCTGAAGT AATCATAGCA
ACTGACCCAG ATAGAGAAGG ATATGCTATA GGATTTTTTA TGTATGAAGA ATTAAAGAAA
AAAGCAAAGG AAGTAAAAAG AGCTGAATTT CATGAAATTA CTAAGGAGCA TATTAAAGAA
AAAATAAAAA ACGCAGTTCC ATTTGAAAAA ACAAATTTTG GATTATTTAA TGCGTTTCTT
GGAAGAAGGG TTGGAGACAG GATTGTTGGT TATACATTAT CACCGATAGC ATCAAGAGAG
ATAGGTGGAA GATTCAGCGT CGGTAGAGTT CAGTCTCCAG CTGTAAGATT GATAGTAGAA
AGAGAAATAG AAATTCAAAA TTTCAAGCCA ACGCCGTACT ATGTGTTATC TGCTGTTTTA
CGTGCAACGT CTCACGTCTC ACCTCTCACG TTTACAGCTA TTTATGAAAA TCCAAAAATA
GAAAACAAAG AAGAAGCAGA AAAAATCTAT GCAGATATAA AAGATGAGAA AATAGCTACT
ATAAAGAAAG TAGAAAAAAA GCAAGTAAAA CAATCCCCAA AACCACCATT TACAACTTCT
ACACTCCAGC AAACCGCTAG CACAGTTTAT AGATTTGCTC CAGAAAAAAC GATGATGTTA
GCCCAAGACC TTTTTGAAAG CGGACTTATT ACATACCACA GAACAGACAG CGTGAGAATA
AGTGAAAAAG CTATAGATGG AATTAGAAAT CTAATAAACA AAGAGTTTGG TAAAGATTAT
CTGCCGGAAA AAATAAGAGT TTACAAATCA AAAAATACAC AAGCAGATGC CCATGAAGCC
ATAAGAATCA CCCATTTTGT AAACTTAGAA GAACAAAAAA AGCTTATTAA AGAAAAAGGT
TTATCAGAAG ACCATTTTAA ACTGTTAAAG CTTATCTATG AGAGAACAGT AGCATCTCAG
ATGGCTGATG CAATTTTTGA AAGAACAAGT GCGGCTGTTG ATATAAAAGG CTATACATTT
AAAGCCAGTG GCTCAATCTT AAAATTTAAA GGTTATAAGG CTGTTTATGA TTTAGAAGAA
GAGGAAGATA AAGAAGAAAA TCAAAAACTA CCAGATTTAA AAAATAAAGA TGTCTTAACG
CTTGAAAAAA TAAATTTGGA AGAAAAATTT ACAAAACCAC CGGCAAGATA CACAGAAGGC
GGACTTGTCA AAAAATTGGA AGAGCTTGGT ATAGGTAGAC CTTCAACCTA TGCAACGATA
ATAAAAACTA TAAAAGAAAG AGGTTATGTA GTTAAGGAAA ATGGAAGTTT AAGACCAACA
GAAAACGCCT TTCATCTGAT TGAATATTTA AACACTCGCT ACAATTGGGT GATAGATTAC
TCTTTTACAA AGAAAATGGA AGATTTTCTT GATAAAGTAG AAGAGAATAA AAAAGATTGG
AAAGAGTTTG TAAAACAGCT TCATGAAAAA TCAGGTTCAA AACAAAATGT GAAAATATCA
AAGAAAATGC TTGATTATGC AAAAGATTTA GCAGAAAAAC ATGGCAAAAG CATAGAAGAG
ATAAAAGATG ACCCAGAAAA ACTAAAAGAG TTTATCGATG CTCACGCTGA AAAAAATCCA
TCTCAAAAAC AAATAGAATA CGCAAAAAGT TTGGCTGAAA AAACGGGCTT GAAACTAACA
GAGAAAGAGC TTTTAGATAG AAAATTGCTT ACAAAATGGA TAAATAAAGC AAAGAAAGAA
ATGATGAAAA ACTACCAGTT GTCAGAAAAA CAAAAAAATG TTTTAATAAA GTATGGTAGA
GAAGATTTGG TTAACAATCC GGTCCAAGCT TTAAAGTTTA TAAAAAGTAA GCTTTCAAGA
TATAAAAAAT AA
 
Protein sequence
MSEKKIVIVE SPKKAKEISH FLGKDFIVKA TVGHFKDLPE NEMGVDLNTY EPKFVIKSQN 
HKKILSEIKK LAEKSEVIIA TDPDREGYAI GFFMYEELKK KAKEVKRAEF HEITKEHIKE
KIKNAVPFEK TNFGLFNAFL GRRVGDRIVG YTLSPIASRE IGGRFSVGRV QSPAVRLIVE
REIEIQNFKP TPYYVLSAVL RATSHVSPLT FTAIYENPKI ENKEEAEKIY ADIKDEKIAT
IKKVEKKQVK QSPKPPFTTS TLQQTASTVY RFAPEKTMML AQDLFESGLI TYHRTDSVRI
SEKAIDGIRN LINKEFGKDY LPEKIRVYKS KNTQADAHEA IRITHFVNLE EQKKLIKEKG
LSEDHFKLLK LIYERTVASQ MADAIFERTS AAVDIKGYTF KASGSILKFK GYKAVYDLEE
EEDKEENQKL PDLKNKDVLT LEKINLEEKF TKPPARYTEG GLVKKLEELG IGRPSTYATI
IKTIKERGYV VKENGSLRPT ENAFHLIEYL NTRYNWVIDY SFTKKMEDFL DKVEENKKDW
KEFVKQLHEK SGSKQNVKIS KKMLDYAKDL AEKHGKSIEE IKDDPEKLKE FIDAHAEKNP
SQKQIEYAKS LAEKTGLKLT EKELLDRKLL TKWINKAKKE MMKNYQLSEK QKNVLIKYGR
EDLVNNPVQA LKFIKSKLSR YKK