| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0337 |
|---|
| Symbol | |
|---|
| ID | 6332240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 344956 |
|---|
| End bp | 345807 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642656623 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_001930536 |
|---|
| Protein GI | 188996285 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000175107 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTA AGATACTAAC AGCAATTGAC TTAACAGAAG ATAGTAAGAC TGTTTTAGAA
GCCGGCTCTA AAATTGCCAA AGCTAAAAAT GCAACAGTTT ATATTGTTTA TGTTTTAGAG
CCGCCAAATG TTCCATTTTT TGATGAGCTT CCGACAGAAG AAAAAGAAGC TCTTTTAAAT
TTGCAAAAAG TTTTAAAAGA AAAAGCTAAA GAAACTTTAT CTGAATATAA ACAAAAACTT
GAATCGGAAG GTTTATGTAT AGTTCCAATT ATCTTACAAG GTCAAGTTGT TGAGTCTGTT
TTAGAATTTT CCGAAAACAA TGATATTGAT TTAATTATTG TAAAATCTCA TAAAAAATCA
GAGATTGAAG AAAAAGCCAT AGGTAGCAAC TCTTTAAGAA TAGCATCAAA GTCCAAAATT
CCGGTACTTG TTATAAAAGA CGACAAAACT CAGTATAATC ATATACTTGT TGCCTATGAC
TTTTTGCCTA CTTCTGAAGA AGCATTGAAA TTTTCATTGG ATTTAGCATC TATTTATAAT
TCAAAGCTTA CAGTAATTCA TGTTGATAAT GATTCACATT TTACTCACAT AAAATCAGTT
TATGAAAAAG TAAGGCAGCA TAAGATTGAA AAATTACAAA AGCTAAAAGA AGAGTATCCA
TCGATCGAGG TTGTATACAA AGAAGGTCTC CCGGAAAGGG AAATTTTAAA GTTTTCAGAA
AAAGAAAACG TTGACCTTAT AGTTACAGGT AAAAGGAAAG ATAAAGGCGG AAAGTTGTCG
TTTATAGGTT CTACATCTTA TAAAATACTT AAAGGAGCAA AGACTGCTGT TTTAGTATTT
AGGAGTAAAT AA
|
|---|
| Protein sequence | MLRKILTAID LTEDSKTVLE AGSKIAKAKN ATVYIVYVLE PPNVPFFDEL PTEEKEALLN
LQKVLKEKAK ETLSEYKQKL ESEGLCIVPI ILQGQVVESV LEFSENNDID LIIVKSHKKS
EIEEKAIGSN SLRIASKSKI PVLVIKDDKT QYNHILVAYD FLPTSEEALK FSLDLASIYN
SKLTVIHVDN DSHFTHIKSV YEKVRQHKIE KLQKLKEEYP SIEVVYKEGL PEREILKFSE
KENVDLIVTG KRKDKGGKLS FIGSTSYKIL KGAKTAVLVF RSK
|
|---|
| |