| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0336 |
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| Symbol | |
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| ID | 6332239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 343283 |
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| End bp | 344956 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642656622 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001930535 |
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| Protein GI | 188996284 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000572448 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TTTTATTGTC AGCACTTGTT TTGTGTAATA CTGCATTTGC AGGTATAAAC
ATAAAACCAT CTTCAGAAAA TCCATTATTT TATTACGGAA TATGTAAGAT AGCCAAAGAC
AGGCATGATA TAAAAACAGC CTACGAATTT TGTAGAGAAG CTGTTAAACG TATGCCTGAC
ACACCTGCAG TTTATAGAGA AACGATTTTC CTCGCATACA GTCTTGGTAA AAAAGAAGAA
GCTTTTGAAT TGCTAAAAAC TTACAAAGAG AGATTTAAAA ACGACCCAGA AACTTATCTG
TTTTTATCTT TCTTTTACAA CGTAACGAAA AATCAAAAAG AAGCTTTAGC TGTATTGGAA
GAAGGATATA AAAAATTTCA AAACAATGAA AAAATAATTT CAGCTTTGAT TGACCAATAT
ATTGAAAATA AAAATTTAAA CAAAGCAAAG GAGCTTTTAG AAAAGCTTGC TACAATAAAA
AAAGATGACC CATCTATCTA TTACAAAATA GCAAGAATAT ACCTTTTTGA AAACAACGCG
CAAAAAGCAG AAGAGTATCT AAAAAAATCT TTACAAATCG ACAAAAAGTA TAAACCAGTA
TGGCAACTTC TTGGCGAGAT TTACAGACAA TCCGGCAATT ACGATAAAGC AATAGAAATC
TACAAAAACA TACTAAAAGA TGACCCTAAT AATCTTGAAG CTTTAAACAG ACTATTTCAG
ATTTACGTAG ATAAAGATGA CTTCAATAAT GCTGCAGAAA CTATAGATAA AATCATCAGA
CTCAATCCAA AAGACAACGA TGCTATATTA AAGAAATTTT TACTTTACAT AAAGTATGGT
AAATCTAACG AAATTTTACA AGATTTAAAA AAATCTTCAC AAGAAAATCC GGATAATCCA
TTCTTAAAAT TTATGCTTGG AATGGCTTAT GAAACCCTGG AAGATTATCA AAATGCAAAA
GCAATTTATG AAGAGTTATA CAAACAACAG CCGGACAACC AAGAACTTAT TGACAGACTT
GTCAGTGTTT ATTTAAACCT AAAAGAATAC GATAAAGCTT TAGAAATTTT AAACAAACTT
TACGTCCAAA ACCCTAAGGA TTATAAAATT CTTTTATCAA TGGCTGATAT AGAAGACAAG
AAAGGAAATA TAAAAAGAGC ACTTGAGCTT GTTAAAGAAG CTGAAAGTAT AGCACCGGAT
GATCCAACCG TTCATTTTAT AAAGGCAATT TATCTTGATA AACTTGGAAA TTGGCAAGAA
GCAGAAAAAT CCCTTTACAA ATCCTTAGAG CTAAGACCGG ATTATCCTGA TGCTTTAAAT
TATCTTGGAT ACACCTACAT AGATAGAGAA ATAAACATAG ACAAGGGCAT TGAACTTGTT
AAAAAAGCAC TCGAGAAAAT GCCGGATAGC CCTGCTTATT TAGATAGTCT TGGTTGGGGG
TACTACAAAA AAGGTAATTA TACTGAGGCT GAAAAGCTGA TAAAAAAAGC ACTTGAAAAA
ATGCCCGATG ACCCGGTATT AAATGAGCAT TATGCAGATA TTTTACTAAA ATTAAACAAA
AAACAGGATG CTGTAGAGTA CTACAAAAAA GCTTTAGAGC TAATAGATAA AAAGGGTGAA
GGAGAGCCAA ATCAAAAAGA AAGAGTTTTA AGAAAGCTTA AAGATTTGAG GTAA
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| Protein sequence | MKKLLLSALV LCNTAFAGIN IKPSSENPLF YYGICKIAKD RHDIKTAYEF CREAVKRMPD
TPAVYRETIF LAYSLGKKEE AFELLKTYKE RFKNDPETYL FLSFFYNVTK NQKEALAVLE
EGYKKFQNNE KIISALIDQY IENKNLNKAK ELLEKLATIK KDDPSIYYKI ARIYLFENNA
QKAEEYLKKS LQIDKKYKPV WQLLGEIYRQ SGNYDKAIEI YKNILKDDPN NLEALNRLFQ
IYVDKDDFNN AAETIDKIIR LNPKDNDAIL KKFLLYIKYG KSNEILQDLK KSSQENPDNP
FLKFMLGMAY ETLEDYQNAK AIYEELYKQQ PDNQELIDRL VSVYLNLKEY DKALEILNKL
YVQNPKDYKI LLSMADIEDK KGNIKRALEL VKEAESIAPD DPTVHFIKAI YLDKLGNWQE
AEKSLYKSLE LRPDYPDALN YLGYTYIDRE INIDKGIELV KKALEKMPDS PAYLDSLGWG
YYKKGNYTEA EKLIKKALEK MPDDPVLNEH YADILLKLNK KQDAVEYYKK ALELIDKKGE
GEPNQKERVL RKLKDLR
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