Gene SYO3AOP1_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0322 
Symbol 
ID6331523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp329967 
End bp330572 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content35% 
IMG OID642656607 
ProductATP-dependent Clp protease, proteolytic subunit ClpP 
Protein accessionYP_001930521 
Protein GI188996270 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA TTTTAAATCA ATTAATACCA ATAGTTATAG AACAAACACC AAGAGGTGAA 
AGAGCATACG ATATATATTC AAGACTATTA AAAGATAGAA TAATTCTTCT TGGAACACCT
ATTGATGACC ATATTGCTAA CTTAGTTGTT GCACAGCTTT TATTTTTAGA ATCTGAAGAT
CCGGATAAAG ATATTTATAT GTACATTAAC TCTCCCGGTG GTGTAGTTAC TGCCGGTCTT
GCTATTTACG ATACTATGAA CTACATAAAA CCAGACGTAG TTACAATCTG CATGGGGCAA
GCAGCATCTA TGGGAGCTTT CTTACTCTCT GCCGGAGCCA AGGGAAAGAG ATACTCTCTA
CCAAATGCAA GAATAATGAT TCACCAACCA CTTGGTGGAT TCCAAGGACA GGCTACGGAT
ATAGAAATCC ATGCAAGAGA AATTCTAAGA CTTAAAAGAA TGTTAAACGA ATACTTAGCA
AAGCACACAG GACAGCCAAT TGAAAAAATA GAAGCAGACA CAGAAAGAGA TTACTTTATG
TCTGCTGAAG AGGCTAAGGA ATATGGTCTT ATAGATAAAG TTATTTATAA AAGAGGTGAA
AAATAA
 
Protein sequence
MDKILNQLIP IVIEQTPRGE RAYDIYSRLL KDRIILLGTP IDDHIANLVV AQLLFLESED 
PDKDIYMYIN SPGGVVTAGL AIYDTMNYIK PDVVTICMGQ AASMGAFLLS AGAKGKRYSL
PNARIMIHQP LGGFQGQATD IEIHAREILR LKRMLNEYLA KHTGQPIEKI EADTERDYFM
SAEEAKEYGL IDKVIYKRGE K