Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0307 |
Symbol | |
ID | 6331980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 315574 |
End bp | 316371 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642656592 |
Product | protein of unknown function DUF52 |
Protein accession | YP_001930506 |
Protein GI | 188996255 |
COG category | [R] General function prediction only |
COG ID | [COG1355] Predicted dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000324759 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACAG TAAGAAAACC AGCTGTTGCG AATATGTTTT ATACTGGGAA TAAAGAAAGA CTTCTATATA CAATTAAAAA CTATTTGAAT AAAGCACCTT TGTATGATTA TATTCCTGAG GGAATCGTAG TTCCACATGC AGGATACATT TATTCTGGCC CTGTTGCAGC AGTTTCATAT AAACAGCTTT TAAACCTTGA CCCAAGCAAA CATTACAAAA TTTTACTGAT AGGACCATCC CACCATGTAT ATTTTAATGG AGTTTCTTAT GGATTTTATG ATTACTGGGA AACCCCCCTT GGAAAAGTAA AAGTTAATAA AGAAGCGATT ATAAAATTCT CAAAAGAACA TCCGGATTTT CCATTAACAT TAAATACTCT TCCACATCAA AGAGAACACT CCTTGGAGGT TCAGGTGCCA TTTCTGCAAG TTGTACTAAA GGACTTTGAA ATTTTACCAT TTGTATATGG AGATATTGAT AGTAGTATCG TTGAGAATAT TATAGAATAC TTCAAAGATA ATGATACAGT AGTAATTATA AGTACAGATT TAAGTCATTA CTATCCGGAT AATATAGCCA GAGAAATAGA TAAATATTGC CATCTTGCGG TTTTGGAATT AAATGAAAAT TATCTTAAAA ACTGTGAAGC ATGTGGAAAA ATTGGTCTTG AAGCAATGAT AAAATACGCA AAAAGACATG GATTAAAATC TAAAATCCTT GATTATAAAA CATCAGGCGA TACAGGAGGA GATTATAGCA GTGTTGTCGG GTATGGAAGT TATATCTTCT ATAAGTAA
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Protein sequence | MLTVRKPAVA NMFYTGNKER LLYTIKNYLN KAPLYDYIPE GIVVPHAGYI YSGPVAAVSY KQLLNLDPSK HYKILLIGPS HHVYFNGVSY GFYDYWETPL GKVKVNKEAI IKFSKEHPDF PLTLNTLPHQ REHSLEVQVP FLQVVLKDFE ILPFVYGDID SSIVENIIEY FKDNDTVVII STDLSHYYPD NIAREIDKYC HLAVLELNEN YLKNCEACGK IGLEAMIKYA KRHGLKSKIL DYKTSGDTGG DYSSVVGYGS YIFYK
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