Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0306 |
Symbol | |
ID | 6331672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 313497 |
End bp | 314687 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642656587 |
Product | elongation factor Tu |
Protein accession | YP_001930505 |
Protein GI | 188996254 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000239655 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG AGAAATTTGT AAGAGGAAAA GAGCACCTAA ACGTAGGAAC AATAGGGCAC GTTGACCACG GAAAAACAAC ATTAACAGCA GCAATCACAT ACGTACAAAG CAAAAAAGGA TTAGCAAAAT TTGTTGGATA TGGAGACATA GACAAAGCTC CAGAAGAAAG AGAAAGAGGA ATTACAATCA ATATCACACA CGTAGAATAT GAGACAGAAA AAAGACACTA TGCACACGTA GACTGCCCAG GACACGCAGA CTACATCAAG AACATGATCA CCGGTGCAGC GCAAATGGAT GGAGCAATCC TTGTAGTATC AGCAGCAGAC GGACCAATGC CACAAACAAG AGAACACGTA CTCCTTGCAA GACAGGTTAA CGTACCATAC ATCGTAGTAT TCTTAAACAA ATGCGACATG GTAGACGACC CAGAACTAAT AGACTTAGTA GAAATGGAAG TAAGAGAACT ACTAAGTAAA TATGACTTTC CAGGAGATGA AGTGCCTGTA ATAAGAGGGT CAGCACTTGG AGCATTAAAC GATGACCCAA AATGGTTTGC ATCAGTAGAA GAGCTATTAA AAGCAATGGA TGAATACATA CCAACACCTC CAAGAGAAAC AGACAAACCA TTCCTAATGG CAGTAGAAGA CGTATTCACA ATAACAGGAA GAGGAACGGT AGTAACAGGA AGAGTAGAAA GAGGAACATT AAAAGTAGGT GACGAAGTAG AGATAGTAGG ACTATCGGAA GAGAAGAAGA AGACAGTAGT AACAGGAATC GAGATGTTCA GAAAACAATT AGATGAAGCA ATAGCAGGAG ACAACGTAGG AGTACTATTA AGAGGAATCA CAAAAGACGA AGTAGAAAGA GGACAAGTAT TAGCAAAACC GGGAACAATC ACACCACACA AGAAATTCAA AGCACAAGTA TACGTATTAA GCAAAGAAGA AGGTGGAAGA CATACACCAT TCTTCTTAGG ATACAGACCA CAGTTTTACA TCAGAACAGC AGACATAACA GGAACAGTAG TAGAATTACC AGAAGGGCAA GAGATGGTAA TGCCAGGAGA TAACGTAGAG TTAACAGTAG AGTTAATGGT ACCAGTAGCT ATGGAAGAGC AAATGAGATT TGCGATAAGA GAAGGTGGAA GAACAGTAGG TGCTGGTGTT GTTACTAAAA TAATTGAATA A
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Protein sequence | MAKEKFVRGK EHLNVGTIGH VDHGKTTLTA AITYVQSKKG LAKFVGYGDI DKAPEERERG ITINITHVEY ETEKRHYAHV DCPGHADYIK NMITGAAQMD GAILVVSAAD GPMPQTREHV LLARQVNVPY IVVFLNKCDM VDDPELIDLV EMEVRELLSK YDFPGDEVPV IRGSALGALN DDPKWFASVE ELLKAMDEYI PTPPRETDKP FLMAVEDVFT ITGRGTVVTG RVERGTLKVG DEVEIVGLSE EKKKTVVTGI EMFRKQLDEA IAGDNVGVLL RGITKDEVER GQVLAKPGTI TPHKKFKAQV YVLSKEEGGR HTPFFLGYRP QFYIRTADIT GTVVELPEGQ EMVMPGDNVE LTVELMVPVA MEEQMRFAIR EGGRTVGAGV VTKIIE
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