| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0301 |
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| Symbol | rplA |
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| ID | 6331804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 310998 |
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| End bp | 311726 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656581 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001930500 |
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| Protein GI | 188996249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000226656 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAAA GAGGAAAAAA ATATTTAGAA GCATTAAAGC TCATTGATAA AGAAAAGACT
TACAGCCTTG ATGAAGCTAT CCAAAAACTA AAAGAAGTGG AAAAAATTCT GCAGAGAAAG
TTTGATGAAA CAGTAGAGCT TATCTTTAGA TTAGGTGTTG ACCCCAAGTA TGCTGACCAA
ATGGTAAGAG GTTCAGTAGT GCTCCCTCAT GGATTAGGAA GAGAGTTAAA AGTTCTTGTT
ATCGCTTCCG GTGAAAAGTT AAAAGAGGCA GAAGAGGCAG GTGCTGATTA TGCAGGAGGT
GAAGAGATTA TCAATAAGAT CGCAAATGAA AACTGGATAG ATTTTGACAT TGTGATAGCA
ACTCCAGATA TGATGCCCAA ATTGGCTAAG CTCGGTAAAA TCTTAGGACC AAGAGGCTTA
ATGCCAAACC CTAAGGTTGG AACTGTTACG ACTGACGTTA AAAGAGCAGT TACAGAAGCT
AAAAAAGGTA GAGTAGAGTT TAAAGTTGAT AAAACAGGTA ACTTGCATGT TCCAGTTGGT
AAAATTTCAT TTGAAGATCA TAAGCTTAAA GAAAATATTT TAGCTGTTGT AGATGCGGTA
TTGAAAGCTA AGCCACCCGG TGCAAAAGGT CAGTATATAA GAAATGTTGT TTTAAAAACA
ACGATGAGCC CTTCAGTTAA ATTAAATCCA GCTGAATTAC AAAAAGCTTT AGAAACTAAA
GCAGCTTAA
|
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| Protein sequence | MAKRGKKYLE ALKLIDKEKT YSLDEAIQKL KEVEKILQRK FDETVELIFR LGVDPKYADQ
MVRGSVVLPH GLGRELKVLV IASGEKLKEA EEAGADYAGG EEIINKIANE NWIDFDIVIA
TPDMMPKLAK LGKILGPRGL MPNPKVGTVT TDVKRAVTEA KKGRVEFKVD KTGNLHVPVG
KISFEDHKLK ENILAVVDAV LKAKPPGAKG QYIRNVVLKT TMSPSVKLNP AELQKALETK
AA
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