| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0276 |
|---|
| Symbol | |
|---|
| ID | 6332746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 288325 |
|---|
| End bp | 288870 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642656556 |
|---|
| Product | ribosomal protein L6 |
|---|
| Protein accession | YP_001930475 |
|---|
| Protein GI | 188996224 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.017278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAA TTGGAAAAAA ACCGATAGAT ATACCTAAGG GAGTTGAGGT TTCAATCGCT
CCGGACAATA CTGTTAGCGT GAAAGGTCCA AAGGGGCAGC TCTCTTATAA ATTTCATCCA
AGTATCTCAA TCACAAAAAA TGAAAATCAA ATCATAATTG AAAGAAAATC TGAAGACCCA
TTTTCACGAG CAGTTCATGG AACTACAAGA GCACTCTTAA ACAATATGGT CAAAGGTGTA
ACAGAAGGTT TTACAGAAGA GCTTGAAATT GTTGGTATTG GTTATAGAGC AGCTGTAAAA
GGAAATAACT TAGAATTAAC CTTAGGTTAT TCCCATCCTG TAATTTATCC AATTCCAAAA
GATGTACAAA TAACCGTAGA AGGGAATACT AACATTAAAG TTAGTGGTAT TGACAAACAA
AGAGTTGGTC AAGTTGCTGC AGAAATTAGG TCATTTAGAG AACCAGACCC ATACAAAGGA
AAAGGCATAA GGTATAAAGG TGAAGTGATT AAGCTAAAAG CTGGTAAAAC TGTCGGTAAA
AAATAA
|
|---|
| Protein sequence | MSRIGKKPID IPKGVEVSIA PDNTVSVKGP KGQLSYKFHP SISITKNENQ IIIERKSEDP
FSRAVHGTTR ALLNNMVKGV TEGFTEELEI VGIGYRAAVK GNNLELTLGY SHPVIYPIPK
DVQITVEGNT NIKVSGIDKQ RVGQVAAEIR SFREPDPYKG KGIRYKGEVI KLKAGKTVGK
K
|
|---|
| |