Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0274 |
Symbol | rpsE |
ID | 6332744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 287341 |
End bp | 287925 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642656554 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001930473 |
Protein GI | 188996222 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.129476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGTAA GAAATATAGA AAGATTGATT GAGCAAAGAA TTAAAGAAAA TCCAATAAAT CCAGATATAC TTAACTTAGA AGAAAAAGTT GTTGAAATCA GAAGAACCAC TCGTGTTATG GAAGGTGGAA GACGTTTTTC ATTCAGCACA CTTGCTATAG TAGGCGATAG AAATGGTCAT GTTGGATTTG GACATGGTAA AGCAAGAGAG GTTCCGCCAT CTATCGCAAA AGCTATAGCA GATGCGAAAA AAAGAATTAT TAAAGTTGCT TTAATTGAGG GTACTGTTCC GCACGATGTT TATGGAGAGT ATGACTCAGC AGTGGTTTTA TTAAAACCTG CAAGGAGAGG TACTGGTGTG GTTGCAGGTG GACCAATGAG ACCAGTATTA GAGCTCTTGG GAGTTACCGA CGTTTTAGCA AAAATCGTTG GAAGAACTAC AAATCCTAAT GCTGTAGTTA GAGCAACGTT TGACGCACTT TTAAAGCTCA AATCTCCAGA AGAAGTTGCA AAAGTAAGAG GATTAGAAGA AGAAAAAATA AAATCTGTAT ATAGAATATA TGCAGGAGGA GTGCCTGTAA GATGA
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Protein sequence | MGVRNIERLI EQRIKENPIN PDILNLEEKV VEIRRTTRVM EGGRRFSFST LAIVGDRNGH VGFGHGKARE VPPSIAKAIA DAKKRIIKVA LIEGTVPHDV YGEYDSAVVL LKPARRGTGV VAGGPMRPVL ELLGVTDVLA KIVGRTTNPN AVVRATFDAL LKLKSPEEVA KVRGLEEEKI KSVYRIYAGG VPVR
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