Gene SYO3AOP1_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0274 
SymbolrpsE 
ID6332744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp287341 
End bp287925 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content38% 
IMG OID642656554 
Product30S ribosomal protein S5 
Protein accessionYP_001930473 
Protein GI188996222 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.129476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGTAA GAAATATAGA AAGATTGATT GAGCAAAGAA TTAAAGAAAA TCCAATAAAT 
CCAGATATAC TTAACTTAGA AGAAAAAGTT GTTGAAATCA GAAGAACCAC TCGTGTTATG
GAAGGTGGAA GACGTTTTTC ATTCAGCACA CTTGCTATAG TAGGCGATAG AAATGGTCAT
GTTGGATTTG GACATGGTAA AGCAAGAGAG GTTCCGCCAT CTATCGCAAA AGCTATAGCA
GATGCGAAAA AAAGAATTAT TAAAGTTGCT TTAATTGAGG GTACTGTTCC GCACGATGTT
TATGGAGAGT ATGACTCAGC AGTGGTTTTA TTAAAACCTG CAAGGAGAGG TACTGGTGTG
GTTGCAGGTG GACCAATGAG ACCAGTATTA GAGCTCTTGG GAGTTACCGA CGTTTTAGCA
AAAATCGTTG GAAGAACTAC AAATCCTAAT GCTGTAGTTA GAGCAACGTT TGACGCACTT
TTAAAGCTCA AATCTCCAGA AGAAGTTGCA AAAGTAAGAG GATTAGAAGA AGAAAAAATA
AAATCTGTAT ATAGAATATA TGCAGGAGGA GTGCCTGTAA GATGA
 
Protein sequence
MGVRNIERLI EQRIKENPIN PDILNLEEKV VEIRRTTRVM EGGRRFSFST LAIVGDRNGH 
VGFGHGKARE VPPSIAKAIA DAKKRIIKVA LIEGTVPHDV YGEYDSAVVL LKPARRGTGV
VAGGPMRPVL ELLGVTDVLA KIVGRTTNPN AVVRATFDAL LKLKSPEEVA KVRGLEEEKI
KSVYRIYAGG VPVR