Gene SYO3AOP1_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0273 
SymbolrpmD 
ID6332704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp287165 
End bp287344 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content28% 
IMG OID642656553 
Product50S ribosomal protein L30 
Protein accessionYP_001930472 
Protein GI188996221 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0832356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AAGTGAAATT AATTAAAGGA TTGGCTGGTA AAGATCAAAA ACAAAAACAA 
GCATTAAGAT CTCTTGGATT AAAGAAGATT TATGAAGAAA GAATTTTAGA AAAAAATCCT
GCGGTACTTG GCAATTTAGA TAAAGTAAGA CACTTAGTTA AAGTGGAGGA AGTTGAATAA
 
Protein sequence
MKIKVKLIKG LAGKDQKQKQ ALRSLGLKKI YEERILEKNP AVLGNLDKVR HLVKVEEVE