| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0248 |
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| Symbol | |
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| ID | 6331188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 268114 |
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| End bp | 269820 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642656528 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_001930447 |
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| Protein GI | 188996196 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGCT ATGACGTTTT AATAGTTGGA GCCGGTGGAG CTGGATTAAT GGCTGCACTT
GAAGCAAGCA AAGCAAAAGA TGTTAAAGTA GGGGTTGTTA CAAAAGTTTA TCCAACAAGG
TCTCACACAG GTGCAGCCCA AGGTGGAATT AATGCTGCTC TTGCAAACTT TGACCCATCA
GATAGCCCAG AAGTTCATAC TTTTGACACT GTAAAAGGTA GTGATTATCT TGGAGACCAA
GACGCTATAG AATTTATGTG TTATGAAGCT CCAAAAAGAA TATACGAATT AGAACACTTA
GGAGTTCCAT TTTCAAGATT GCCAGATGGA AGAATAGCAC AAAGACCTTT CGGTGGCGCT
GGATTTCCAA GGACATGCTA TGCAGCAGAT AAAACAGGAC ACGTAATCTT ACATACATTA
TACGAACAAT GCTTAAAAAA TGATGTTGAA TTTTTAAACG AATGGTTTGT AACAGAGTTA
ATCATAGATA ACAACGAAGC CAAAGGTGTT ATAGCTATAG ATATAAGAAG TGGCGAAGTG
CATGCAATAA AAGCAAAGGC CGTTATCTTT GCAACAGGTG GCTATGCAAG AGTTTACTGG
GTAAGAAACA CGAATGCTAT AGGTTCAACC GGTGATGGAA TGGCTATTTG CTACAGAGCG
GGCATTCCGC TTAAAGATAT GGAGTTTGTT CAATTCCACC CAACAGGATT AAGGTCTACT
GGTATACTTG TTACAGAGGG TGCAAGAGGT GAAGGTGGAT ACTTAATCAA CAATAAAGGC
GAAAGATTTA TGGCAAGATA TGCTCCACAA AAGATGGAGC TTGGTCCAAG GGACCTTGTG
GCAAGGTCTA TAGAGACAGA AATCCTTGAA GGTAGAGGTT GGGGCGAAGG AATGATGGCA
TACGTCCACC TTGACCTTAG ACATCTTGGA GCTGAAAAAA TCAAATCAAG ACTTCCTCAG
ATTAGACAGT TATGCATAGA TTTTGAAGGT GTTGACCCAA TAGAAGAGCC AATTCCAGTT
AGACCAACAG CTCACTACTC TATGGGTGGT ATTGATGTAA GAGACTATAA AACAAGTATG
ACAGGCGTTA ATGGTGTGTT TGCAGTTGGT GAATGTGCAT GTGTTTCTGT TCATGGAGCA
AACAGACTTG GGGGAAACTC TTTACTTGAC TTAGTAGTAT TCGGAAAACC GGCTGGAGCT
GCTGCAGTTG AGTATGCAAG AAGCAAATCA GCAGATAACT TTAACTTAAA AGCAGAAGAA
GAAAGAGCAA GAAGAGAAAT TGAACAACTT CTTAAAAAAG AAAGCAAAGA AAACATAAAT
AACATCAGAA TTGAGCTTGC TCAAACAATG TGGGATAAAG TTGGAATTTT CAGAGAAGAA
AAACCAATGC TTGAAGCTAT AGAAAAAATT AAGGAGTTAA AAGAAAGATA TAAACTCCTT
GCTCCGGGTG ATAGCGGAAA AATCTTCAAT ACAGCTCTTA TAAACTACAT AGAGCTTGGA
TATCTCTTAG ACCTTGCTGA GGCTATCGCA ACAACGGCAG TGTTAAGAAA AGAAAGCAGA
GGTGCTCACG CAAGAAGAGA CTATCCAAAC AGAGATGATG AAAATTTCTT AAAGCACAGC
TTATCTTATT ACACACCAGA AGGTCCAAAA GTAGAATACT CTGAAGTAAA AATCACAAAA
TATCAACCGC AAGAAAGAAC TTATTAA
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| Protein sequence | MLSYDVLIVG AGGAGLMAAL EASKAKDVKV GVVTKVYPTR SHTGAAQGGI NAALANFDPS
DSPEVHTFDT VKGSDYLGDQ DAIEFMCYEA PKRIYELEHL GVPFSRLPDG RIAQRPFGGA
GFPRTCYAAD KTGHVILHTL YEQCLKNDVE FLNEWFVTEL IIDNNEAKGV IAIDIRSGEV
HAIKAKAVIF ATGGYARVYW VRNTNAIGST GDGMAICYRA GIPLKDMEFV QFHPTGLRST
GILVTEGARG EGGYLINNKG ERFMARYAPQ KMELGPRDLV ARSIETEILE GRGWGEGMMA
YVHLDLRHLG AEKIKSRLPQ IRQLCIDFEG VDPIEEPIPV RPTAHYSMGG IDVRDYKTSM
TGVNGVFAVG ECACVSVHGA NRLGGNSLLD LVVFGKPAGA AAVEYARSKS ADNFNLKAEE
ERARREIEQL LKKESKENIN NIRIELAQTM WDKVGIFREE KPMLEAIEKI KELKERYKLL
APGDSGKIFN TALINYIELG YLLDLAEAIA TTAVLRKESR GAHARRDYPN RDDENFLKHS
LSYYTPEGPK VEYSEVKITK YQPQERTY
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