| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0244 |
|---|
| Symbol | |
|---|
| ID | 6332258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 263365 |
|---|
| End bp | 265188 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642656524 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001930443 |
|---|
| Protein GI | 188996192 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA ACTTTCAAGA AATTGAAAAC AGTTTTTTAA AAGAATGGGA AGAAAATAAA
ATATTCAAAA CAAAAGAGGA AGAAGGAAAT AAATATTATG TTCTTGAAAT GTTTCCGTAT
CCATCCGGAA AAATCCATAT GGGACATGTG AGAAACTATG CAATAGGTGA TATAGTAAAC
AGATATTATA GAATGGCAGG AAAAAATACA CTTCATCCGA TGGGATGGGA TGCTTTTGGA
ATGCCTGCAG AAAACGCAGC AATAAAGCAC GGCGTCCATC CAGCAAAATG GACTTATGAA
AACATAGACT ATATGAGACA ACAATTAAAA AGACTTGGCT TTTCTTATGA TTGGGACAGA
GAAGTGACTA CCTGCAATCC GGAATATTAT AAATGGAACC AATGGATATT CTTAAAGATG
TTTGAAAAAG GAATTGCATA CAGAAAATCA GCAATTGTAA ACTGGTGTCC GCATGACCTA
ACAGTACTGG CAAACGAACA AGTTATTGAA GGAAAATGTT GGAGGTGTGG AACTCCTGTT
GTTCAAAAAG AAATTCCGTC TTGGTATTTA AAGATAACAG ACTATGCAGA AAGGCTTCTT
GAAGATTTAG AAAAACTAAA AGGAAAATGG CCTTCACAAG TTTTGATTAT GCAAGAAAAT
TGGATAGGAA AATCAGAAGG AGCAACGATA AAATTTCCGG TTAAAGATTC ATCAGACTAC
ATAGAAGTTT TTACAACAAG ACCGGACACT ATTTTTGGCG TTACGTTTAT GGCATTGGCA
CCAGAAAATC CTCTAGTTTT AGACCTTGCA AAAGACACTC CATATTTTGA AGAAGTTAAA
GCTTTCGTAG ATAAAATCAA AGCAATGTCT ACAAAAGAAA GGGGAATTGT TGAAGAAAAA
GAAGGCGTGT TTACAGGAAA GTATGCAATA AATCCACTTA CAAATGAAGA GATTCCTATA
TATGCAGCAA ACTATATACT TTGGGGATAT GGAACAGGAG CAATTATGGC AGTTCCGGCT
CATGATGAAA GAGATTTTGA GTTTGCAAAA AAATATAACC TTCCTATAAA AGTAGTAGTA
CAGCCAAAAG ATAAAGAATG GGATTTTGAA AAATCAGCGC ATGAAGAAGA AGGAATTTTA
ATAAACTCAG GAGAATTTAG TGGACTTGAA TCTTCAAAAG CAAAGCAGGA GATTACAAAA
TATTTGGAAG AAAAAGGTTT AGGAAAGAAA ACCATAAACT ATAAACTAAG AGACTGGAAC
ATCTCTCGTC AAAGATACTG GGGCACTCCT ATACCTATTA TTTACTGTGA TGATTGTGGA
ATAGTTCCGG TGCCAGAAGA AGATTTACCT GTAGTCCTTC CACAGGATGT AGAATTTACA
GGAGTTGGTG GATCTCCGTT GTCAAAGGTG GAAGAGTTTG TCAATACAAC CTGTCCTAAG
TGTGGAAAGC CGGCAAAAAG AGAAACCGAC ACAATGGATA CATTCGTTGA CAGTTCATGG
TACTTTTTAA GATACTGCGA CCCAAAAAAT GACAAACTTC CTTTTGATAA AGAAAAAGTT
GACTACTGGA TGCCGGTTGA TATATACATT GGCGGTATAG AGCATGCTGT TTTACATCTT
TTATATTCAA GATTTTTCAC TAAGTTTTTG AAGGATATAG GTTTAGTATC CGTAGATGAA
CCATTTGAAA AGCTTCTTAC CCAGGGAATG GTATTGAAAA AATGGATAAG CATAGGTAAG
CTTCTTGAAA TTTTAGGCGT AGATGAGAAT GTATCGGTAG ATGGGTTTAA AGAGAAGTTA
GAGGAGTTTG TAAGTAAAAG GTAG
|
|---|
| Protein sequence | MEYNFQEIEN SFLKEWEENK IFKTKEEEGN KYYVLEMFPY PSGKIHMGHV RNYAIGDIVN
RYYRMAGKNT LHPMGWDAFG MPAENAAIKH GVHPAKWTYE NIDYMRQQLK RLGFSYDWDR
EVTTCNPEYY KWNQWIFLKM FEKGIAYRKS AIVNWCPHDL TVLANEQVIE GKCWRCGTPV
VQKEIPSWYL KITDYAERLL EDLEKLKGKW PSQVLIMQEN WIGKSEGATI KFPVKDSSDY
IEVFTTRPDT IFGVTFMALA PENPLVLDLA KDTPYFEEVK AFVDKIKAMS TKERGIVEEK
EGVFTGKYAI NPLTNEEIPI YAANYILWGY GTGAIMAVPA HDERDFEFAK KYNLPIKVVV
QPKDKEWDFE KSAHEEEGIL INSGEFSGLE SSKAKQEITK YLEEKGLGKK TINYKLRDWN
ISRQRYWGTP IPIIYCDDCG IVPVPEEDLP VVLPQDVEFT GVGGSPLSKV EEFVNTTCPK
CGKPAKRETD TMDTFVDSSW YFLRYCDPKN DKLPFDKEKV DYWMPVDIYI GGIEHAVLHL
LYSRFFTKFL KDIGLVSVDE PFEKLLTQGM VLKKWISIGK LLEILGVDEN VSVDGFKEKL
EEFVSKR
|
|---|
| |