| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0231 |
|---|
| Symbol | |
|---|
| ID | 6331419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 247652 |
|---|
| End bp | 249400 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642656509 |
|---|
| Product | acetolactate synthase, large subunit, biosynthetic type |
|---|
| Protein accession | YP_001930430 |
|---|
| Protein GI | 188996179 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000329619 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAG AAAAAAGAGG AGCAGATATA GTAGTTGATG TTTTAATAAA AGAAGGCGTT
GATACTGTTT TTGGTTTACC TGGTGGAGCA ATAATGGAAG TTTACGATGC ATTGTTTGAT
GCTCCATTTA GAAACGTACT GACAAGACAC GAACAGGCTG CATGTCATAT GGCCGATGGA
TATGCAAGAG CTACCGGAAA AGTAGGGGTA GTTATAGCCA CATCAGGTCC TGGAGCTACA
AATCTTGTTA CAGGATTAGC TACTGCATAC ATGGATTCAA TTCCACTTGT TGCAATAACA
GGTCAGGTTC CAAGACATTA TATAGGAACT GATGCATTTC AAGAAGCAGA CGTTATAGGT
ATCACAAGAC CAATCACAAA GCATAACTTC TTAGTAACTG ATATAAAAGA TTTACCCCTT
ATTTTAAGAC AGGCATTTTA TATAGCAAGA ACCGGAAGAC CCGGACCTGT TTTAGTTGAT
ATCCCAAAAG ACATAACTCA ACAAAAAACA ACTTACAAAA TGCCAACAGA TGAAGAAGTT
AGAGAATCTT TACCCGGATA CAACCCACAT ACAGAAGGAA ACCCGGTTCA GATAAAAAAA
GCTGCAGAAC TGATTAGAAA AGCAACAAGA CCGGTGTTAT ACGTTGGTGG TGGTGCCATC
CTTTCAGATG CTGCAGAAGA AATCTATAAA TTAGCACACT TGGCCCAAAT ACCGGTTACT
ACTACAAATA TGGGCAAAGG AGCATTTCCA GAAACTGACC CTCTTTCATT ACACATGCTT
GGAATGCATG GAACATATTA CGCAAATATG GCTGTTTATC ATAGCGATTT ACTTATAGCT
GTAGGAGCAA GATTTGACGA TAGAGTTACA GGAAAGATCA ATGAATTTGC ACCGGAAGCT
AAAATCATTC ATATTGATAT AGACCCGGCA TCTATTAGTA AAACCATAAC AGTTGACGTT
CCAATCGTTG GTGATGTTAA GAATGTTTTA AGAAAGCTTA TTAAAGAGTT AGAAGAAAAA
CCTATTGAAT GGATTGCAGC AAGAGAGCAA TGGCTTAAAC AGATTAACGA ATGGAAAGAA
AAGCATCCAT TAAATTACAG AAAGTCTGAT AAAATAATAA AACCCCAAGC GGTAATAGAA
GAGATATACA ATATAACTAA TGGAGAGGCT ATCATCTCTG CCGGCGTAGG ACAGCATCAA
ATGTGGGCTG CAATGTTTTA TAAATATAAG TACCCAAGAC AATTTTTAAA CTCAGGCGGT
CTTGGAACAA TGGGATTTGG TTTTCCGGCT GCTGTTGGAG CTAAAATAGG AAGACCGGAT
AAAACAGTAT TTGCCATAGA AGGTGATGGT TCATTCATAA TGAATGTCCA AGATTTAGCA
ACAGCTGTTC AGTATAGAGT TCCGGTAAAA ATAGCCATAA TAAACAATGG ATTTCTTGGA
ATGGTAAGAC AGTGGCAACA ATTTTTCTAC GATAGCAGGT ATGCAAGCGT ATGTTTATCT
GTTCAGCCGG ATTTTGTAAA ATTGGCAGAA AGCTTTGGTG CTGTAGGTCT TAGAGCAACA
AAACCATCAG AAGTTAGGGA AGTATTATTA AAAGCTATGG AAATAAACGA TAGACCTGTT
TTAATGGATT TTGTGGTTGA TAAGGAAGAG AATGTTTTAC CAATGGTACC AGCCGGAAAA
AGCTACAGAG AAATGATATT AACACCTAAC CAAAAAGGCG AAGCAGAGAC TATGTACTTA
GTGGGGTAA
|
|---|
| Protein sequence | MTKEKRGADI VVDVLIKEGV DTVFGLPGGA IMEVYDALFD APFRNVLTRH EQAACHMADG
YARATGKVGV VIATSGPGAT NLVTGLATAY MDSIPLVAIT GQVPRHYIGT DAFQEADVIG
ITRPITKHNF LVTDIKDLPL ILRQAFYIAR TGRPGPVLVD IPKDITQQKT TYKMPTDEEV
RESLPGYNPH TEGNPVQIKK AAELIRKATR PVLYVGGGAI LSDAAEEIYK LAHLAQIPVT
TTNMGKGAFP ETDPLSLHML GMHGTYYANM AVYHSDLLIA VGARFDDRVT GKINEFAPEA
KIIHIDIDPA SISKTITVDV PIVGDVKNVL RKLIKELEEK PIEWIAAREQ WLKQINEWKE
KHPLNYRKSD KIIKPQAVIE EIYNITNGEA IISAGVGQHQ MWAAMFYKYK YPRQFLNSGG
LGTMGFGFPA AVGAKIGRPD KTVFAIEGDG SFIMNVQDLA TAVQYRVPVK IAIINNGFLG
MVRQWQQFFY DSRYASVCLS VQPDFVKLAE SFGAVGLRAT KPSEVREVLL KAMEINDRPV
LMDFVVDKEE NVLPMVPAGK SYREMILTPN QKGEAETMYL VG
|
|---|
| |