Gene SYO3AOP1_0213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0213 
Symbol 
ID6331742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp229400 
End bp231226 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content36% 
IMG OID642656491 
ProductGTP-binding protein TypA 
Protein accessionYP_001930412 
Protein GI188996161 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTAG AAGAGAAAAG AGTACCAAAA GCAGTTAGGG AAGATATTAG GAATATTGCT 
ATTATTGCCC ACGTAGACCA TGGAAAAACA ACGCTTGTTG ACGCACTACT TAAACAAAGT
GGTACTTTTA GAGAAAATGA AGAAGTAGCG GAAAGAGTTA TGGATAATAT CGACTTAGAA
AGAGAGCGTG GTATCACAAT TATGGCAAAA AATACAGCTA TAAGATATAA AAACTATAAA
ATTAACATCG TTGATACTCC GGGGCACGCT GATTTTGGCG GAGAGGTAGA AAGAACATTA
AAAATGGTTG ATGGTGTAAT ACTTCTTGTT GATGCATCAG AAGGACCACT TCCTCAGACA
AGATTTGTTT TAAGAAAAGC GTTAGAATCT AATCTAACAC CTATCGTTGT TATAAACAAA
ATAGATAGAC CGGATGCAAG AATTCAAGAA GTGATAAATG AAGTTTACGA TTTATTTATA
GATTTAGACG CAACGGAAGA GCAGCTTGAA TTTCCAATTC TTTACACGAT AGCAAGAGAC
GGAATCGCAA AAGAAAACCT TGAAGATGAT TCAAAAGATT TAAAACCATT GTTTGATAAA
ATCATAGAAT ATATACCGGC ACCATCTTAT GACCCGGACA TGGGATTACA ATTTCTGATT
ACATCCTTAG ATTATGACAA CTTCGTCGGG AGGTTAGCAA TTGGAAGAAT TTTTAATGGT
TCTGTAAAAG TAAATCAACA AGTGTCAGTG GTAAAAAAAG ATGGAACAAT AATTAAAGGA
ACTGTAAGAA CATTATATAC TTACGAAGGA CTCAAAAGAG TAGAAACAAA AGAAGCAAAA
GCAGGAGATA TAGTAGCAAT AGCAGGATTG GAAGATATAA CCATCGGAGA AACTATAGCT
GACGCTGAAA ATCCTGTAGG ACTTCCTCCA ATAACAGTAG AAGAGCCAAC AATATCTATG
ATATTCTCAG TAAACGATTC TCCATTTGCA GGAAGAAGCG GAAAATTTTT AACATCAAGA
CATTTAAGAG ATAGATTGTA CAAAGAGACA TTAACTAACG TTGCTATAAG AGTATCTGAC
ACAGAAAATC CAGACTCATT CTTAGTAATG GGTAGAGGAG AATTACAGCT ATCCATACTG
GCTGAAATGA TGAGAAGGGA AGGCTATGAG TTTCAAGTAT CAAAACCGGA AGTTATAGTA
AAAGAAGAAA ATGGTAAAAA ATTAGAGCCG GTAGAAAGGG TTTTAATAGA TATTCCGGAA
GAGTACGTAG GAACAGTTAC TCAAAAGCTT GGTTCAAGAA AAGGCAGAAT GATAAACATG
ATTAATCATG GATTTGGAAG GGTAAGGCTT GAATTTATTG TTCCATCAAG AGGACTGATT
GGATACAGGT CAGAGTTTAA AACAGATACA AGAGGCGAAG GCTTAATCAA CACAATCTTT
GAAGGCTGGG AAGAGTGGCA GGGAGAGATT AAAACAAGAC AAAACGGAGC ATTGATAGCT
GATAGAAAAG GTGTAGCAAC ACCATACGCA ATTTTTGGAT TACAAGATAG AGGAGTTTTC
TTTATAGAAC CGGGTACAGA AGTTTACGAA GGCATGATTG TAGGAGAACA CAGCAGAGAT
AATGACCTTG ATGTAAACGT AACAAGAGAA AAGAAATTAA CTAACATGAG AGCTTCCGGC
TCTGATGAAA ACATTAAAAT CATCCCGGCT AAAAAGATGG ACTTTGAAAG AGCCATGGAA
TGGATTAATG AAGATGAGCT TATAGAAGTA ACGCCGGATG CTATAAGAAT AAGAAAGAAA
ATTTTAGAAG CAAACAAAAG AAAGTGA
 
Protein sequence
MLLEEKRVPK AVREDIRNIA IIAHVDHGKT TLVDALLKQS GTFRENEEVA ERVMDNIDLE 
RERGITIMAK NTAIRYKNYK INIVDTPGHA DFGGEVERTL KMVDGVILLV DASEGPLPQT
RFVLRKALES NLTPIVVINK IDRPDARIQE VINEVYDLFI DLDATEEQLE FPILYTIARD
GIAKENLEDD SKDLKPLFDK IIEYIPAPSY DPDMGLQFLI TSLDYDNFVG RLAIGRIFNG
SVKVNQQVSV VKKDGTIIKG TVRTLYTYEG LKRVETKEAK AGDIVAIAGL EDITIGETIA
DAENPVGLPP ITVEEPTISM IFSVNDSPFA GRSGKFLTSR HLRDRLYKET LTNVAIRVSD
TENPDSFLVM GRGELQLSIL AEMMRREGYE FQVSKPEVIV KEENGKKLEP VERVLIDIPE
EYVGTVTQKL GSRKGRMINM INHGFGRVRL EFIVPSRGLI GYRSEFKTDT RGEGLINTIF
EGWEEWQGEI KTRQNGALIA DRKGVATPYA IFGLQDRGVF FIEPGTEVYE GMIVGEHSRD
NDLDVNVTRE KKLTNMRASG SDENIKIIPA KKMDFERAME WINEDELIEV TPDAIRIRKK
ILEANKRK