Gene SYO3AOP1_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0189 
Symbol 
ID6331387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand- 
Start bp204874 
End bp205467 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content29% 
IMG OID642656467 
ProductRibonuclease H 
Protein accessionYP_001930388 
Protein GI188996137 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.682381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATG TTGAAAAAGA ACTTTTTAGT CAAGGTTATG AAAAAATTGT TGGTATAGAT 
GAAGCAGGAA GGGGACCGTT AGCCGGTCCT CTTGTTATTG CATCAGTCAT TTTTCCTAAG 
CATCAAAAAC CATTCATACA TACTGATTCA AAAGGTCTTT CAGAAAAAGA AAGAGAGTAT 
CTCTTTGAAA AAATTCATGA TTATGCTGAA GAAATAAATA TTACAATCGT AGAAAATACA 
GAAATAGATA AGTTTGGCAT ATCAAATGCT GCAAAAATAT ACATGGAAAA CAATCTAAAA 
TCTTTAAAAT CAAAATGGGA TATAGCTTTA GTTGATTTTG TAAAATTAGA TGAAAGTATA 
AATCACCTAC CTTTAATCAA AGGAGATGAA ATATCTCATA CAATAGCAGC AGCAAGTATA 
ATTGCGAAAG TAGTTAGAGA TAGAATAATG ATTGAGTATA AAGAAAAATA TCCTAACTTC 
TCTTTTGATA AACATAAAGG CTATGCAACT AAACAACATT ATCAAGAGAT AAAAAAATTC 
GGCATTACTC CAATCCATAG AAGAAGCTTT AATCTTGGAG TTAATGATGA TTAA
 
Protein sequence
MDNVEKELFS QGYEKIVGID EAGRGPLAGP LVIASVIFPK HQKPFIHTDS KGLSEKEREY 
LFEKIHDYAE EINITIVENT EIDKFGISNA AKIYMENNLK SLKSKWDIAL VDFVKLDESI 
NHLPLIKGDE ISHTIAAASI IAKVVRDRIM IEYKEKYPNF SFDKHKGYAT KQHYQEIKKF 
GITPIHRRSF NLGVNDD