| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0175 |
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| Symbol | |
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| ID | 6331373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 192216 |
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| End bp | 193172 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656453 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001930374 |
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| Protein GI | 188996123 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA TCATCAGTTT TAAAGTAGAA GAAGAGTTTT CAAATAAGAG ATTAGACCAA
TTTTTAGCCT TAGTTTATCC TGAGTATTCA AGGTCTTTTT ATCAAAATCT TATAGAAAAC
AGATTTGTAT TGTTAGATAA CAATCCTGTT AGAAAATCAT CAACAAAAGT AAAAACCGGG
CAAGAGTTTA CAATCATCAT ACCACCACCC GAGCCTTTAG AAATTGAGCC TGAAAATATT
CCACTTGAAA TCTACTACGA AGACGAAGAT TTAGCAGTAG TCTATAAACC ACCCGGAATG
GTCGTTCATC CATCGGTTGG TCATACATCG GGAACGCTGG TAAATGCTTT ACTTTATCAT
TTTAAAAATG TATCACAGTA TCAAGGAAAA GAAAGGGCAG GGATTGTTCA TAGGTTAGAT
AAAGATACCG CCGGACTTTT GATTGTAGCA AAATCAGAAT TTGCACATAA AGAACTTCAA
AAAATGTTTC AAGATAGAGA AATAGACAAA AAGTATAAAG CTATCGTTTC TGGAATAGTA
AAAAAAGACC ATGGCTTAAT AGACTTACCT ATTGGAAGGT CTATTTACAA CAGGCAAAAA
ATGGGAACGG TAGCAACAAA CCCTAAGGAT GCACTAACAG AATACTGGGT AGAAAAACGC
TTTGAAAAGC ACAATCTAAC ACTTGTTGAT ATAAAACTTC ACACAGGAAG AACACATCAA
ATAAGAGTTC ATTTTTCAGC CATCGGACAT CCGTTATTTA ACGATTTTGT TTATGGATTT
AAAAAATCGA ACTTATCATC AGACCTTGCA AAAAATTTAT CAGATAAACT TAAATATCAT
GCACTTGTAG CATATAAACT AACATTCAGA CATCCAAGAA CAAACCAAAT GCTAAGCATA
GAGCTTAAAA GCTTACCAAA AGAAATAGAA GAAATACTGC AGGAGTTAAG TAAGTGA
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| Protein sequence | MEEIISFKVE EEFSNKRLDQ FLALVYPEYS RSFYQNLIEN RFVLLDNNPV RKSSTKVKTG
QEFTIIIPPP EPLEIEPENI PLEIYYEDED LAVVYKPPGM VVHPSVGHTS GTLVNALLYH
FKNVSQYQGK ERAGIVHRLD KDTAGLLIVA KSEFAHKELQ KMFQDREIDK KYKAIVSGIV
KKDHGLIDLP IGRSIYNRQK MGTVATNPKD ALTEYWVEKR FEKHNLTLVD IKLHTGRTHQ
IRVHFSAIGH PLFNDFVYGF KKSNLSSDLA KNLSDKLKYH ALVAYKLTFR HPRTNQMLSI
ELKSLPKEIE EILQELSK
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