| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0172 |
|---|
| Symbol | |
|---|
| ID | 6331370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 187807 |
|---|
| End bp | 188355 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642656450 |
|---|
| Product | 2'-5' RNA ligase |
|---|
| Protein accession | YP_001930371 |
|---|
| Protein GI | 188996120 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1514] 2'-5' RNA ligase |
|---|
| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TTTTTATAGG CAGTTTTATT GATAGCAAAG GATTAAAAAA GCATTATACA
GAGATTAAAA AAGATTTTTC GGGTGTTTTG ACAGGTAGTT GGGTTAAACC TGAAAACTTT
CACATAACTT ATAAATTCTT AGGAAATGTA GAAGACGATA AGATAGAAGA TATAAAAAAT
AATTTGTCTG AATGTATCAA TAAAGAGATA GAAACGCAGA TAGTCGTTAA AGGGCTTGGA
GTTTTTCCAA ATTTAGACCA GCCAAAAGTT TTATACTTTA AAGTAGAAGA AAACCCAGTC
CTTACAGAGA TAAATAAGTA TGTAGAAAAT CAGATGGCAA ATCTTGGATT TAAAAGAGAG
ATTAAAAGAT TTGTACCTCA CGTTACGATC GTAAGAATTA AAGAAGTGAA GCAACAATCA
TTTTTAGAAA AAATAAAAAA GTATGAAGAC AAAGTCTTTT TTAAACAAAA AATAATAACA
GTTGATATAA TTGAAAGTAT GCTAAATCCA AAAGGTGCAG TTTACAAAAA GGTATGGAAA
CTTATATAG
|
|---|
| Protein sequence | MKRIFIGSFI DSKGLKKHYT EIKKDFSGVL TGSWVKPENF HITYKFLGNV EDDKIEDIKN
NLSECINKEI ETQIVVKGLG VFPNLDQPKV LYFKVEENPV LTEINKYVEN QMANLGFKRE
IKRFVPHVTI VRIKEVKQQS FLEKIKKYED KVFFKQKIIT VDIIESMLNP KGAVYKKVWK
LI
|
|---|
| |