| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0155 |
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| Symbol | |
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| ID | 6331353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 172479 |
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| End bp | 173309 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642656433 |
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| Product | spermidine synthase |
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| Protein accession | YP_001930354 |
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| Protein GI | 188996103 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.164944 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCTGGT TTACTGAGTA TCAAACACCA AACACAGGAT TAACTGTAAA AGTTAAAGAA
GCTAAAACAG TGAAATCAAA GTATCAGGAA ATCTTGATCT TAGATACTTA TGAGTATGGC
AAAATGCTTG TTTTAGATGG TGCAGTTCAA ACAACAGAAA GAGATGAGTT TATATATCAT
GAGATGCTTA CTCATCCTGC CTTGATAAAA CATCCAAACC CAGAAAGAGT TCTTGTTATT
GGCGGTGGTG ATGGTGGAAC AATTAGAGAA GTTTTAAAGC ATCCATCTGT AAAAGAAGCT
CATTTATGTG AAATTGATGA AGAAGTTATA AAAATTTCAA AAGAGTATCT TCCTACAATT
TCATGTGAAC TAAACAATCC AAAAGTCCAA GTTTTTGTAG AAGATGGAAA TAAGTTTTTA
GATGAAAGAA AAAATTATTA TGATGTTATA CTGCTTGACC TATCTGACCC AGTAGGTCCT
GCAGAAGCTT TGTTTAAAAG AGAATTTTAT ACTAAGGTTA AAAATGCACT TAGAGAAAAT
GGAATAATGG CAGCACAAAC TGAATCTCCA TTTTTACAAG AGCTTTATTT TAAGACAGCT
GTAAATGAGA TTAAACAAGT ATTTAAATAT TTTGGAACTT ATTTAGCATT TATTCCAACG
TATCCAGCTG GAATGTGGAG TTTTACATTG GCTTCCGATG ATGTTGATAT TTTAAAGTAT
GAAGAAAGCG AGTTTGAAAA GATTAAGGAT TTGAAAACAA AATATTTTTG TGATAAAATA
TATGCTTCTT TATTTTCAAT ACCAAAATTT GTATCAGATT TAATTAAATA A
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| Protein sequence | MIWFTEYQTP NTGLTVKVKE AKTVKSKYQE ILILDTYEYG KMLVLDGAVQ TTERDEFIYH
EMLTHPALIK HPNPERVLVI GGGDGGTIRE VLKHPSVKEA HLCEIDEEVI KISKEYLPTI
SCELNNPKVQ VFVEDGNKFL DERKNYYDVI LLDLSDPVGP AEALFKREFY TKVKNALREN
GIMAAQTESP FLQELYFKTA VNEIKQVFKY FGTYLAFIPT YPAGMWSFTL ASDDVDILKY
EESEFEKIKD LKTKYFCDKI YASLFSIPKF VSDLIK
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