Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0150 |
Symbol | aspS |
ID | 6331348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 167568 |
End bp | 169376 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656428 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001930349 |
Protein GI | 188996098 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00425968 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGACC AGCTTAGAGA ATTTAAAAGA GATTACTACT GTGGAGATTT AAACGAATCA AATATAGGTG ATGAAGTTAG ACTTCTTGGT TGGGTTGACA CTGTTAGAGA CCATGGCGGA GTTATTTTTA TAAATCTCAG AGACAGAGAG GGTATAGTTC AAGTAGTTTT TGATCCATCA AAAATTGGAG AAGAGTTATA CAATAAAGCG AAAAAACTCA AATCAGAATA CGTTATCGGT GTGAGAGGTA GAGTTTACAG AAGACCTGCA GGTACTGAAA ATCCTAAAAT GAAAACAGGA AACATAGAAG TAGCCGGTGA AGAGCTTTTA ATCTTAAACA CATCCAAGGC TTTACCTTTT CCAATAGAAG ATAATATAAA AGTTAGCGAA GAAGTTAGAT TAAAATACAG ATATTTAGAC TTAAGAAGAC CATCTATGCA AAGAAACATA ATATTAAGAC ACGAAGTATA TCAAGCTGTA AGAGAGTTCT TAGCCGGAAA TGGATTTATT GAAGTAGAAA CCCCAATGCT TACAAAATCA ACACCGGAGG GAGCAAGAGA CTTTTTAGTT CCATCAAGAT TAGAAAAAGG CAAATTTTAT GCACTTCCAC AATCACCACA GCTATTTAAA CAAATCTTAA TGGTTGCAGG ACTTGAAAGA TACTTCCAAA TAGCCAAATG TTTTAGAGAT GAAGACCTAA GAGCAGACAG ACAGCCAGAA TTTACACAAA TAGACTTAGA GATGTCTTTT GTAACAGAAG ATGATGTGAT GACTTTAGCA GAATCTTTGA TTCAGTATGT ATACAAAAAA GTTCTTGGAA TTGATATAAA AATTCCTTTT AGAAGAATGA GCTATGAAGA AGCTATAAAT AAATATGGAA CAGACAAGCC TGACCTAAGA TATGGCTTAG AGCTTATAGA TATTACAGAT TTAGCAAAAG AGGTAGAATT TAAAGTATTT AACGATGTAG CAAAATCCGG CGGGCTTGTA AAAGGTATAA ACATTAAAGG TGGATCTAAA TTTTCAAGAA AAGAAATTGA CGAGCTTACA GAATACGCTA AAAAGTTTGG TGCCAAAGGA ATGGCATGGG TTAAACTTGA AAATGGAGAA GCTACTTCTC CAATCCTAAA ATTCTTCACA GAAGAGCAAA AACAAAAGTT ATTTAGCCTT ATGGATGCAA AAGATGGAGA CTTGCTAATA TTTATTGCAG ATAAAAAAGA TATCACTCAC AAAGTTTTAG GATTTTTAAG AAAGCATATA GCAGAAAAAA TGAATCTAAT AGACAATAGC AAATTAGAGT TTTTATGGGT GGTTGATTTT CCACTTTTTG AATGGGACGA AGAAGAAAAT AGACTTGTTG CAATACACCA TCCGTTCACA AGTCCAAAAG ACGAAGATAT AGATAGATTG GACGAAGCTT TAAACAGTCC AGAAATTGCA CTTAGCTTTA AATCAAAAGC TTACGACATG GTTTTAAATG GTGAGGAGAT AGGTGGGGGT TCAATAAGAA TACATACACC TTACATACAA GAAAAAGTAT TCCAGCTTTT AAACATTTCA GAAGAAGAGG CAAAAGAAAA ATTTGGGTTT TTAATAGAAG CTTTAAGCTA CGGAGCACCA CCACACGGCG GATTAGCTTT TGGTCTTGAT AGAATTTTAG CACTTATGAC AGGTAGCGAA AGCATAAGAG ACGTAATCGC ATTCCCTAAG ACACAAAAAG GAATATGTCC GCTAACAGGA GCACCGGATT ATGTTTCAGA AAAACAACTT AAAGAAGTAG GAATAAAAGT AGAGGTAGAT GAAGAATGA
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Protein sequence | MIDQLREFKR DYYCGDLNES NIGDEVRLLG WVDTVRDHGG VIFINLRDRE GIVQVVFDPS KIGEELYNKA KKLKSEYVIG VRGRVYRRPA GTENPKMKTG NIEVAGEELL ILNTSKALPF PIEDNIKVSE EVRLKYRYLD LRRPSMQRNI ILRHEVYQAV REFLAGNGFI EVETPMLTKS TPEGARDFLV PSRLEKGKFY ALPQSPQLFK QILMVAGLER YFQIAKCFRD EDLRADRQPE FTQIDLEMSF VTEDDVMTLA ESLIQYVYKK VLGIDIKIPF RRMSYEEAIN KYGTDKPDLR YGLELIDITD LAKEVEFKVF NDVAKSGGLV KGINIKGGSK FSRKEIDELT EYAKKFGAKG MAWVKLENGE ATSPILKFFT EEQKQKLFSL MDAKDGDLLI FIADKKDITH KVLGFLRKHI AEKMNLIDNS KLEFLWVVDF PLFEWDEEEN RLVAIHHPFT SPKDEDIDRL DEALNSPEIA LSFKSKAYDM VLNGEEIGGG SIRIHTPYIQ EKVFQLLNIS EEEAKEKFGF LIEALSYGAP PHGGLAFGLD RILALMTGSE SIRDVIAFPK TQKGICPLTG APDYVSEKQL KEVGIKVEVD EE
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