| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0124 |
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| Symbol | |
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| ID | 6331322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 137532 |
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| End bp | 139010 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642656403 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001930324 |
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| Protein GI | 188996073 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00884448 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA ACAAAGAAAA AATAGCACTT ATTATAGGAA ATATTATCAT ATACTTAGCT
CTTATATTTC TTTTATATTT AGACAAAAAA AACAAAGAAA ATATTTATCT TAACGACAAA
ATCAATCAAT TAAAATCTGA ATTCCTAATT ACCAAGAGAA CTTATGATAA AGCTTCGGAA
TTATTTTATA ACACAAGAAT AAAAAATAGT TCGGTTATTA AATATTGTGG AGATTTTTCG
AAAAGAAGCG CAATATTGAA TACTTTTTAT GATGATTATA GATTTTTAAG AAAAATTGGT
TTTGATAGAT TTATATTTAC ATTACCTGAT GGTACAGTTT ATCTAAGAAT GCATAACTTT
GACAGGTATG GCGATAAAAT ATCAGAAATA GCTGAAATAG CAAATTATGA AAATAATTAT
CTTTCAATAG ACAAAAACTT ACTTGACAGT TTAGTTTATC TATATCCCAT TTTTTTAAAT
AATAAAAGAG TATGCGATGT ATATTTAAAT GTCCCATTTT ACAAAATTTC AGATGATTTA
GCAAACACAT TCAATAAGTC ATATCTTTTT ATAATAAAAA AAGATTTCCT TAATTTAAAA
GAGAATAAAG GATATATTCA AAGCGATTTA AGTCCTGATT ATTTTGTTGA ATCAAAATTT
TATAATCAAA TACTTAAGAC GAAAAATAAT GATTCTTTTA GTCTATCTGA GATTAACAAA
AAAGCAAAAA AAGAAATAGA TAAAAAATTA AGAGAAGAAG TTTCTTTTTC TTATCCTATT
GATATAAACG GAAATACTAT TTTAATGACT TTTATGTTAA TTAAAAGTTT TAATAATATA
TCGATAGGTT ATTTAATATC TTATGAAGCA GATACAACTT TCAAAGTTTT TTCAAAATCG
TTTTATATAA TGATTTCATC TTTACTATTT ATCATGATTA TCATTAACAT ATTTATTATA
AATATAATTA AACTAAAAAA CGTGGCTGAG AAGAAAGCCA TTACTGATAA ATTAACAGGA
CTATTCAATA GGTCTATTAT TGACACATTA ATTCAGGTTG AAATAGAAAG AGCAAAAAGA
AATAATAAAC CAATTTCAAT ATTATTATTT GATATTGACC ATTTCAAAAA AATAAACGAT
ACCTATGGGC ATGACAAAGG AGATTATGCA TTAAAAACAA TTGCTGAAAT AGCAAGAAGG
ACTTTAAGAA AATCTGATTA TGTTCTTAGA TGGGGGGGAG AAGAATTTCT TGCCATATTA
CCAGAAACAG ATTTAGATGG TGCTACAAAA GTAGCTGAAA AGATAAGGTC TAATATAGAG
AATTATAACT TTAAAGATAT TGGTAGAGTG ACAGTAAGTA TTGGTGTAAC AATGTTAAAA
ATAGGTGAAC CTTTGGATAA TGCAATAAAA AGAGCAGATG AAGCTCTTTA TGCAGCCAAA
AACAAAGGAA GAAATAGAGT TGAGGTTAGC TATTACTGA
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| Protein sequence | MKKNKEKIAL IIGNIIIYLA LIFLLYLDKK NKENIYLNDK INQLKSEFLI TKRTYDKASE
LFYNTRIKNS SVIKYCGDFS KRSAILNTFY DDYRFLRKIG FDRFIFTLPD GTVYLRMHNF
DRYGDKISEI AEIANYENNY LSIDKNLLDS LVYLYPIFLN NKRVCDVYLN VPFYKISDDL
ANTFNKSYLF IIKKDFLNLK ENKGYIQSDL SPDYFVESKF YNQILKTKNN DSFSLSEINK
KAKKEIDKKL REEVSFSYPI DINGNTILMT FMLIKSFNNI SIGYLISYEA DTTFKVFSKS
FYIMISSLLF IMIIINIFII NIIKLKNVAE KKAITDKLTG LFNRSIIDTL IQVEIERAKR
NNKPISILLF DIDHFKKIND TYGHDKGDYA LKTIAEIARR TLRKSDYVLR WGGEEFLAIL
PETDLDGATK VAEKIRSNIE NYNFKDIGRV TVSIGVTMLK IGEPLDNAIK RADEALYAAK
NKGRNRVEVS YY
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