| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0113 |
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| Symbol | |
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| ID | 6331305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 126461 |
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| End bp | 127582 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656392 |
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| Product | cytochrome c-type biogenesis protein CcsB |
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| Protein accession | YP_001930313 |
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| Protein GI | 188996062 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000313165 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAATG TAGTTGTTTT TGAAAATAAG AATAAACCAT CGTATTTAGA AGCAGGTTTA
TTTGTTGGTG TCATTTTAGC ATTATTAGGA TTATCTGTTT TCTTAGCTTT ATCGTCAGGA
AAGGTTAGTA ACGTTCTTGT GTTTCAAATT GCCGGCTTTA TTTATGGTTT ATCAGCATTG
ATGTATATTT TTCAGTTTTT CTTTAAAAAT GAAAATATCG GTAAGGTTGG TACATTACTT
GCATTTGCCG GATGGTTAAC ACAAACAATA GGATTGTTTA TAAGAGGTTT AGAATCTTAT
AATATGGGTA TTTTCCATCC ACCTTGGACA AACCTTTATG AATCTTTAAT GTTTTTCCCG
TGGCTTGCAG TTGGACTGTA TTTATACATT GAGAGAGAAT ACAAAACAAG AACTATTGGA
ACATTTTTCA TGCCGATCGT TGCATTTTTG GTTATCTGGG GTCATAAGTT TAATACTGAT
ATAAATCCGT TGGTGCCTGC TTTAAGAAGC TATTGGCTCT ACCTTCATGT CCTTGCATCG
TTTGTAGGTT ATGCAGGTTT TACAGTAGCA TTTGGTGCAT CTTTTGCTTA TCTACTTAAA
GAAGCTCAAG TTAAAAACAA ACCGGTAAAT ACGTATCATT ATGTAGGATT TATTTTAAGC
TTAATCTTAA CGGGGATTTT TGGATATCTT ACTTTAACCG GTGCTAAGGA TATTAAAACA
ATGATTTTTG GAATTATCTT TATCATCACT CTTATAACTT TAATTTATTT TGCTGTATAT
GTCCTAAAAC CCATAGCCAA TAAACTTCCA TCTGAAAATT TACTTTCAGA GATTGCTTTT
AAAGCAGTTG CTATCTCTTT TCCTGTATGG ACTGCATCTA TAATGCTTGG CGGTGCATGG
GCAAATGAGG CTTGGGGTAG TTATTGGAGC TGGGACCCTA AGGAAACTTG GGCTTTAATA
GTTTGGTTAT TCTTTGCAGC ATACATACAC GGAAGAACTA TCGGAAAATG GAAAGGTGAG
ACTTCTGCAT GGATAGTGGT AGCAGGCTTT ATAATGCTTT TAATCTGTTA TTTTGGAGTA
AACTTATACT TCCCTGGCTT ACATAGTTAT GCTACAGAGT AA
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| Protein sequence | MDNVVVFENK NKPSYLEAGL FVGVILALLG LSVFLALSSG KVSNVLVFQI AGFIYGLSAL
MYIFQFFFKN ENIGKVGTLL AFAGWLTQTI GLFIRGLESY NMGIFHPPWT NLYESLMFFP
WLAVGLYLYI EREYKTRTIG TFFMPIVAFL VIWGHKFNTD INPLVPALRS YWLYLHVLAS
FVGYAGFTVA FGASFAYLLK EAQVKNKPVN TYHYVGFILS LILTGIFGYL TLTGAKDIKT
MIFGIIFIIT LITLIYFAVY VLKPIANKLP SENLLSEIAF KAVAISFPVW TASIMLGGAW
ANEAWGSYWS WDPKETWALI VWLFFAAYIH GRTIGKWKGE TSAWIVVAGF IMLLICYFGV
NLYFPGLHSY ATE
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