| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0101 |
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| Symbol | |
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| ID | 6331293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 111328 |
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| End bp | 112008 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642656381 |
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| Product | Deoxyribonuclease V |
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| Protein accession | YP_001930302 |
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| Protein GI | 188996051 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000658544 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGATAG ATTTAGAAAG CCTGAAAAAA CAACAAATAG AGTTATCTAA AAAATTAAGT
TTAAAAGATA GGATAAATAC AGATGAAATA AGATATATTG CAGGGATAGA TACAACGTTT
TTGAATCCTT ATCAAAATCC AACTTTAGCC ATTTCTTCGA TTGTGGTAAT AGATATAAAA
TCATTTGAGA TTGTAGAAAA AGTTTTGGCA GAGAAAGAGA TAGATTTTCC TTACGTTCCT
ACTTTCTTAG CCTTTAGAGA ACTGCCGATT ATTTTAGAAG CTTATAAAAA ACTTAAGACA
AAGGCTAACG TTTTTATCCT TGATGGACAG GGGATATTAC ATCCAAGGAG AATGGGCATT
GCATCACATT TTGGAGTTAT TACTGATACA GTTTCTATTG GGTGCGGCAA AACACCTCTA
TATGGAAAGT ATCAAGATCC ACCAAATCAA GATTTAGCAT ATAATTTTAT ATATGACCCA
AAAACTAATG AAAAAATAGG TTATGCTTTA AGAACTAAGA AAAACACTAA ACCAATATTT
ATATCACCGG GAAATAACAT TTCAATAGAA AATTCTCTTT ATGTTATAAT AAAGTCATTG
AATGGATATA AACTTCCTGA GCCAGTCAGA TTAGCACACA ATTTTTTATC TGATTACAGA
AAGAAGTTAA TCGGAGGTTA A
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| Protein sequence | MEIDLESLKK QQIELSKKLS LKDRINTDEI RYIAGIDTTF LNPYQNPTLA ISSIVVIDIK
SFEIVEKVLA EKEIDFPYVP TFLAFRELPI ILEAYKKLKT KANVFILDGQ GILHPRRMGI
ASHFGVITDT VSIGCGKTPL YGKYQDPPNQ DLAYNFIYDP KTNEKIGYAL RTKKNTKPIF
ISPGNNISIE NSLYVIIKSL NGYKLPEPVR LAHNFLSDYR KKLIGG
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