| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0091 |
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| Symbol | |
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| ID | 6331282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 101855 |
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| End bp | 103732 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656370 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_001930292 |
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| Protein GI | 188996041 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00172576 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATATGGT TTTTAATCGG TGCTATGATG ATTTTGGCTT TCAATATGTT TGGTTCAAAA
CAGCTTGTTG ATAACAAGGT TCCTTTTACT GAATTCATCA ATATGGTAAA TGAGAAAAAT
ATTAAAGAAG CCACAATAAG AGGAGAAGAG CTTATAGCTG TTACAGAAGA TGGGAAAAAG
GTTGAAACTA TAGTTCCATC CGGCTATTCA AGACTTTATG ATATTTTATC TGAAAATGGT
GTGCAGATAA AAGTATTACC AAGTGAAAGC AGCAATTGGT TTTTAACTTT ATTAGTTTCT
TGGTTGCCAA TACTGCTTTT TATTGGTCTT TGGATTTTTA TGATGAGACA GATGTCTGGT
GGTCCAAATA GGGCATTTTC ATTTGCAAAA AGTAAAGGAA AGCTATATTT AGAAGAAAAG
CCTAATGTAA AACTAGATGA TGTTGCTGGA ATGGATGAAG TAAAAGAGGA AGTAAAAGAG
TTAATAGAAT ATCTTAAAGA CCCATCAAGA TATCAAAAAC TTGGTGGTAG AGCACCAAAA
GGAATATTAC TCTATGGAGA CCCAGGCGTT GGTAAAACAT TATTGGCTAA AGCTATAGCC
GGGGAAGCTA ACGTTCCTTT CATTTCTATA TCAGGGTCAG ATTTTGTTGA GATGTTTGTT
GGTGTTGGTG CTGCAAGAGT TAGAGATTTA TTTGAAACTG CAAAAAAACA TGCTCCATGT
TTAATATTTA TAGATGAGAT CGATGCAGTA GGTAGAGCAA GATCAGGTGT CGGTTTTGGT
GGTGGTCATG ATGAAAGAGA GCAAACATTA AACCAGTTAC TTGTTGAATT AGATGGATTT
GATACAAATG AAGGAATAAT AGTAATTGCG GCGACAAACA GACCAGATAT TCTTGACCCA
GCATTACTTA GACCAGGAAG ATTTGACAGA CAGATTTCTG TTCCAAAGCC GGACGTAAAA
GGAAGATATG AGATACTAAA AGTTCACGTA AATAAAAAGA ACATACCACT TGACGAAGAT
GTGGATTTAA TGACAATAGC AAAAGGAACA CCCGGATTTT CGGGTGCAGA CCTTGCAAAC
CTTATAAATG AAGCAGCACT TCTTGCAGCA AGAAGAAATA AAGAAAAAGT GGGCATGCAG
GAATTAGAAG ATGCATTAGA TAGAATTATG ATGGGATTAG AAAGAAAGGG AATGGCAATA
ACAGAAAAAG AAAAAGAAAA AATAGCATAC CATGAAGTTG GTCATGCAGT AGTTGGAGTA
ATGTTGGAGG AAGCTGACCC ATTGCATAAA GTTTCTATAA TTCCAAGAGG TGCTGCTCTC
GGTGTAACTG TCAATCTTCC GGAAGAAGAC AAGCATCTCT ACTCTAAAAA AGATCTGATG
GCAAGAATCT TACAGCTTTT TGGAGGAAGA GCAGCAGAAG AGGTATTTTA TGGAAAAGAT
GGAATTACAA CAGGTGCTGA AAATGACCTA ATGAGAGCAA CAGAATTGGC TTATAGGATT
GTTGCAGCTT GGGGAATGAG TGATGAAATA GGACCAATAC ACGTTTCTAC AAACAGAAGT
GGTGGATTTT TCTTTGGAAA CCAAGGACCG GAAATTAGTG AAGAAACTGC AAGAAAAATA
GATGAAGAGG TAAACAAAAT ATTAAGAGAA TCTTATCAAA AAGCTAAAAA CATAATAGAA
AGCTATAAGG ATGCCGTTGT GGCGGTGGTT CAGCTTTTAC TTGATAAGGA AACGATAACT
TGTGAAGAAA TGTTTGCGAT TTTAAAAGAG TACGGTGTTC CAGTATTAAA TAGATGCAGA
AAGTTTGAAA GCGTAGTTAC AATAACAGAT TCTTCAAGTT CGGAAACTCC ACCTGCAGAA
CTTCCAGCGC CAGCATAA
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| Protein sequence | MIWFLIGAMM ILAFNMFGSK QLVDNKVPFT EFINMVNEKN IKEATIRGEE LIAVTEDGKK
VETIVPSGYS RLYDILSENG VQIKVLPSES SNWFLTLLVS WLPILLFIGL WIFMMRQMSG
GPNRAFSFAK SKGKLYLEEK PNVKLDDVAG MDEVKEEVKE LIEYLKDPSR YQKLGGRAPK
GILLYGDPGV GKTLLAKAIA GEANVPFISI SGSDFVEMFV GVGAARVRDL FETAKKHAPC
LIFIDEIDAV GRARSGVGFG GGHDEREQTL NQLLVELDGF DTNEGIIVIA ATNRPDILDP
ALLRPGRFDR QISVPKPDVK GRYEILKVHV NKKNIPLDED VDLMTIAKGT PGFSGADLAN
LINEAALLAA RRNKEKVGMQ ELEDALDRIM MGLERKGMAI TEKEKEKIAY HEVGHAVVGV
MLEEADPLHK VSIIPRGAAL GVTVNLPEED KHLYSKKDLM ARILQLFGGR AAEEVFYGKD
GITTGAENDL MRATELAYRI VAAWGMSDEI GPIHVSTNRS GGFFFGNQGP EISEETARKI
DEEVNKILRE SYQKAKNIIE SYKDAVVAVV QLLLDKETIT CEEMFAILKE YGVPVLNRCR
KFESVVTITD SSSSETPPAE LPAPA
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