Gene SYO3AOP1_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0088 
Symbol 
ID6331279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp99351 
End bp100589 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content30% 
IMG OID642656368 
Producttransposase mutator type 
Protein accessionYP_001930290 
Protein GI188996039 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0227234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGA AAGAATACTT TGAAAAAATA TTAGACAGAT CTACCGAAGA ATTAGTAAAA 
GAACTTTTCC CAAACGGTAT AACAACTCAA GAAGAAAAGA TAGGTATAAG AAAGCTTTTA
GAATCTGTTG TGGAACTGAT TATGAATCAG GAAAGAAATT TCTTCCTTGA AAATGATGAA
GACAACAAAG CAAACGGATA TTATGAAAGA AGCCTAAATA CTGGTTCTTT CAAGCTTAAC
ATAAATGTCC CAAGAGATAG AAAGGGTAAA TTTAGACCAC AAATATTACC TGACCCTTAT
AAAAGAGTTA ATGAAGATTA TATAGACCTT CTTATGAGTT TGGTATCCAA TGGATACTCA
GAAAGCAAGA TAGATTCTAC ATTAAAAAGC TTGGGCTTAA ACTACTCAAA ACAACATATG
GATGCAATCA AAAAACAGCT TATAGAAAGA CTTAATGATT TTAAAACAAG AGAGCTTCCA
TCGGATGCAT TTGTACTGTA TATAGACGCA TATCACTGTG ATATAAAAGA GAAAAACAAA
ATCAGAAAGG CTTCTGTCTA TGTAGTTCTT GGAATAGATT TACAAGGAAA TAAAGATATA
TTTGGATTTT ACACATTTTT CAGTAGTGAA AACAAAGCAG ACTGGATAAA AGTATTCAAT
GATTTAATAG ATAGAGGACT AAAAAGGGTA ATGCTTATAG TAAGTGATGA TTTTCCTGGG
ATAACAAAAG CCATAGAAAC ACTATTTCCT TATACAGACC ATCAGCTATG TTTAGTCCAT
TTACAAAGAA ACGTTAGAAA TCAGATGGAT AAAGAAGATT CACAAGTATT TAACAAAGAA
CTGAAAAACA TAAAAGAAAA CAGCTTAGAT TATGAAGATG GATTAGAAAA ATTAGATGAT
TTATGCGGTA GATTTAAGTC TAAATATCCA AGCTTTATAA AACATATTCA ATCTAACAAA
GAGAGATACT TATGTTTTTT AAAATATCCA GAAAATCTAA GAAAGCACAT ATACACAACA
AATCCAGTTG AAAGTGTTAA TAGCATGATA GAAAAGGTAA GAATAAATTT AGGTGGATAT
TTTCAATCTG TGGACATTCT TGAGATAAAT CTGCTTATAC AAAGAGACAA TTTAAAGAAT
GGAAAATGGA AAAAGCCTAT ACCTGCTTTT AAAGGAGTCT CTTATGAAAT TTTACAATTG
TTTAATAAAA AGTTTTCAAT CCAGACACAA AATTATTGA
 
Protein sequence
MDKKEYFEKI LDRSTEELVK ELFPNGITTQ EEKIGIRKLL ESVVELIMNQ ERNFFLENDE 
DNKANGYYER SLNTGSFKLN INVPRDRKGK FRPQILPDPY KRVNEDYIDL LMSLVSNGYS
ESKIDSTLKS LGLNYSKQHM DAIKKQLIER LNDFKTRELP SDAFVLYIDA YHCDIKEKNK
IRKASVYVVL GIDLQGNKDI FGFYTFFSSE NKADWIKVFN DLIDRGLKRV MLIVSDDFPG
ITKAIETLFP YTDHQLCLVH LQRNVRNQMD KEDSQVFNKE LKNIKENSLD YEDGLEKLDD
LCGRFKSKYP SFIKHIQSNK ERYLCFLKYP ENLRKHIYTT NPVESVNSMI EKVRINLGGY
FQSVDILEIN LLIQRDNLKN GKWKKPIPAF KGVSYEILQL FNKKFSIQTQ NY