Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0088 |
Symbol | |
ID | 6331279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 99351 |
End bp | 100589 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642656368 |
Product | transposase mutator type |
Protein accession | YP_001930290 |
Protein GI | 188996039 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0227234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA AAGAATACTT TGAAAAAATA TTAGACAGAT CTACCGAAGA ATTAGTAAAA GAACTTTTCC CAAACGGTAT AACAACTCAA GAAGAAAAGA TAGGTATAAG AAAGCTTTTA GAATCTGTTG TGGAACTGAT TATGAATCAG GAAAGAAATT TCTTCCTTGA AAATGATGAA GACAACAAAG CAAACGGATA TTATGAAAGA AGCCTAAATA CTGGTTCTTT CAAGCTTAAC ATAAATGTCC CAAGAGATAG AAAGGGTAAA TTTAGACCAC AAATATTACC TGACCCTTAT AAAAGAGTTA ATGAAGATTA TATAGACCTT CTTATGAGTT TGGTATCCAA TGGATACTCA GAAAGCAAGA TAGATTCTAC ATTAAAAAGC TTGGGCTTAA ACTACTCAAA ACAACATATG GATGCAATCA AAAAACAGCT TATAGAAAGA CTTAATGATT TTAAAACAAG AGAGCTTCCA TCGGATGCAT TTGTACTGTA TATAGACGCA TATCACTGTG ATATAAAAGA GAAAAACAAA ATCAGAAAGG CTTCTGTCTA TGTAGTTCTT GGAATAGATT TACAAGGAAA TAAAGATATA TTTGGATTTT ACACATTTTT CAGTAGTGAA AACAAAGCAG ACTGGATAAA AGTATTCAAT GATTTAATAG ATAGAGGACT AAAAAGGGTA ATGCTTATAG TAAGTGATGA TTTTCCTGGG ATAACAAAAG CCATAGAAAC ACTATTTCCT TATACAGACC ATCAGCTATG TTTAGTCCAT TTACAAAGAA ACGTTAGAAA TCAGATGGAT AAAGAAGATT CACAAGTATT TAACAAAGAA CTGAAAAACA TAAAAGAAAA CAGCTTAGAT TATGAAGATG GATTAGAAAA ATTAGATGAT TTATGCGGTA GATTTAAGTC TAAATATCCA AGCTTTATAA AACATATTCA ATCTAACAAA GAGAGATACT TATGTTTTTT AAAATATCCA GAAAATCTAA GAAAGCACAT ATACACAACA AATCCAGTTG AAAGTGTTAA TAGCATGATA GAAAAGGTAA GAATAAATTT AGGTGGATAT TTTCAATCTG TGGACATTCT TGAGATAAAT CTGCTTATAC AAAGAGACAA TTTAAAGAAT GGAAAATGGA AAAAGCCTAT ACCTGCTTTT AAAGGAGTCT CTTATGAAAT TTTACAATTG TTTAATAAAA AGTTTTCAAT CCAGACACAA AATTATTGA
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Protein sequence | MDKKEYFEKI LDRSTEELVK ELFPNGITTQ EEKIGIRKLL ESVVELIMNQ ERNFFLENDE DNKANGYYER SLNTGSFKLN INVPRDRKGK FRPQILPDPY KRVNEDYIDL LMSLVSNGYS ESKIDSTLKS LGLNYSKQHM DAIKKQLIER LNDFKTRELP SDAFVLYIDA YHCDIKEKNK IRKASVYVVL GIDLQGNKDI FGFYTFFSSE NKADWIKVFN DLIDRGLKRV MLIVSDDFPG ITKAIETLFP YTDHQLCLVH LQRNVRNQMD KEDSQVFNKE LKNIKENSLD YEDGLEKLDD LCGRFKSKYP SFIKHIQSNK ERYLCFLKYP ENLRKHIYTT NPVESVNSMI EKVRINLGGY FQSVDILEIN LLIQRDNLKN GKWKKPIPAF KGVSYEILQL FNKKFSIQTQ NY
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