| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0087 |
|---|
| Symbol | uvrC |
|---|
| ID | 6331278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 97344 |
|---|
| End bp | 99074 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642656367 |
|---|
| Product | excinuclease ABC subunit C |
|---|
| Protein accession | YP_001930289 |
|---|
| Protein GI | 188996038 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
|---|
| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.139428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA ATTTTAATTG GGCGTTAGAG TTTATAAATA AAGCACCAGA AGAGCCAGGT
GTTTATCTGT TTAAAGATAG TAAAAAGCAA TACGTATACA TCGGAAAAGC TGTAAATATA
AAAAATCGCC TAAAAAATCA TTATCAGCAG TTAAAAGTAG ACCCAAAAGA AAGAAAAATT
TTTAAAGAAA GCTCAAGTAT AGAATGGATA ATAACAAAAT CAGATTACGA AGCATTCGTC
CTTGAAAATG AACTTATCAA ACAGTACAAG CCAAAATATA ATGTAAGATT AAAATCAGGA
AGTAGCTATC CTATGCTTGT TATCACAGAT GAGGAGTATC CCACTGTTAA AATCAGCAGA
AAGTTTGGAG AGATAAAAGG AGAGTATTTC GGACCTTTTC TTCCTGCAAG AACTGCAAGA
GCTATGAAAG AGTTAATTCA TAAACTGTTT AAATTAAGAA CCTGCGACCC ACTGCCAAAA
AGAAGCTTAG TATGTTTTGA TTACCATCTT GGGCTTTGTT CCGGTCCTTG TGCAGATAAA
ATATCTATGA AAGAGTACAA GGAAGATGCA AAGGTTGCTA AAGCTTTCTT ATCCGGAAAT
GTTAAAAATG TTATTTATGA ACTCTACGAC AAAGTAAATG ACTATACAAA CAAGCTGATG
TTTGAGAAAG CAGCAGTCAT TAGAGACCAA ATCAAAGCTA TTGAGATGAC AATAAAGAAA
CAAGAAGTTA TAGGTGTTGG CGTTGAAGAG GCTGATATTT TTTACTTTTC AAGAAGTAGA
GCTTATCTGA TTATCGTAAG AGGAAATAGA ATAGTTGGAA AGGATGAGTT GAAGGTTCAA
AATGAAGAGT TTGAAGAAGG TAATGAAACA GCCATCATCA CTGATTATTA CAGTAAAGAC
ACATACATAC CAAAAACAAT CATCACAAAT AAAGATTTAG AAGACTTAGA AAATCTAAAA
CAATGGCTTT TAAAAGCAAA AAATAAAGAA GTTGAAATAC TTACTTTTCT GCCAGAGCAG
GTGGAAGGCT TTATAAAAAG AAACATAAAC ATAGAAAACA TAGAAAATCT TAAATCAGAG
TTTGAAAAAG TGTTTGGCTT TAGCCTTCCA AACAGGGTAG AATGTTTTGA CATTTCCCAT
CTTGATGGAA AGTTTACCGT TGGTTCTTGC GTTGTTTGGG AAAATGGAAG CATGAATAAA
AAAGAGTACA GAAGGTTTAG AGTTAGAACG GTTAATTATA TAGATGATTT TGCATCATTA
AGAGAAGTTT TAACACGTAG ATTTAGAAGA TATAAAGAGA TGGATAATCC GCCGGAGCTT
GTTTTAATAG ATGGCGGAAA AGGTCAGCTA AGCCAAGGAT TGGCTGTAAG ACAAGAGCTT
GGGCTTGAAA ATCTCCGAGT CTTCTCGATA GCAAAAAAAG AGGAAATTAT CTATACAGAT
GACGGAAAAG AAGTTAGATT GTTTGAAAAT CAAGAGCTTT TAAAATTCTT TACAAAAATC
AGAGATGAAG CTCATAGATT TGCCATTACT TACAACAGAA AATTAAGAGA AAAGGAAGGT
TTAAAAAGCG TTCTTGATAA CATTGAAGGT ATAGGTGAAA AAAGAAAGGA AATTTTATAC
AGGACTTATA AAACATTGGA CAATATTTTA AAGGCAAGCG ACGAAGAGTT AAAAAAGCTT
GGAATTCCTA CATCTGTAAG TCAAAAGATA AAAGAGTATT TAAAGTTGTA G
|
|---|
| Protein sequence | MNKNFNWALE FINKAPEEPG VYLFKDSKKQ YVYIGKAVNI KNRLKNHYQQ LKVDPKERKI
FKESSSIEWI ITKSDYEAFV LENELIKQYK PKYNVRLKSG SSYPMLVITD EEYPTVKISR
KFGEIKGEYF GPFLPARTAR AMKELIHKLF KLRTCDPLPK RSLVCFDYHL GLCSGPCADK
ISMKEYKEDA KVAKAFLSGN VKNVIYELYD KVNDYTNKLM FEKAAVIRDQ IKAIEMTIKK
QEVIGVGVEE ADIFYFSRSR AYLIIVRGNR IVGKDELKVQ NEEFEEGNET AIITDYYSKD
TYIPKTIITN KDLEDLENLK QWLLKAKNKE VEILTFLPEQ VEGFIKRNIN IENIENLKSE
FEKVFGFSLP NRVECFDISH LDGKFTVGSC VVWENGSMNK KEYRRFRVRT VNYIDDFASL
REVLTRRFRR YKEMDNPPEL VLIDGGKGQL SQGLAVRQEL GLENLRVFSI AKKEEIIYTD
DGKEVRLFEN QELLKFFTKI RDEAHRFAIT YNRKLREKEG LKSVLDNIEG IGEKRKEILY
RTYKTLDNIL KASDEELKKL GIPTSVSQKI KEYLKL
|
|---|
| |