Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0056 |
Symbol | |
ID | 6331787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 65484 |
End bp | 66701 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642656337 |
Product | NO3-/NO2-ABC transporter |
Protein accession | YP_001930259 |
Protein GI | 188996008 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAAACA GAAGACAAGT AATCAAAGGA GCAATTGGTG CAGCAATTGT TTCAAGCTTT AGTCCTTACA TTTCAAGAGC TGCAGGGAAA ATAAGAATAG GCTTTATACC TCTTACAGAC TGTGCAACCG TCGTCATGGC ACAAGAACTT GGATTATTCA AAAAATACGG CGTTGATGTA GAAGTAGTAA AAGAGACAAG TTGGCCAAAT ATTAGAGATA AGCTGTTAAA CGGTGAGTTA ACAGCTGCTC ATTGTCTGTT TAGCCTTCCT CTGTCTGTAT ATACCGGAAT AGGTGGTCCT AAGGGTAAAG TTATTCCTAT TGCTATGACT ATTAATTTTA ATGGACAGGG CATAACTCTT TCGAATGAAT TTAAAGGAAA AGTAGGTTTT AGAGAAATAA ATAAAGTAAA ACAAGTAGTC AATGAATTAA AATCAAAAAA AGGTGAATGT ACTTTTGCAA TGACATTCCC GGGTGGAACT CATGATATAT GGTTAAGATA TTGGCTTGGA GCATGCGGTA TTAATCCAAA TAGGGATGTA AGAGTAATTC CAAACCCACC ACCGCAAATG GTTTCAAATA TGAAAGTGGG AAGAATGGAT GGTTTTTGTG TGGGAGAGCC TTGGAATGCG GTTGCTGTTA AGGAAGGTAT AGGCTTTACT CATATTACAT TCCAGGATAT ATGGAAACAC CATCCAGAAA AGGCTTTGGC TTTCAATAAC GAATTTTTTG AAAAAAATCA AGGAGAAGTA AAAGCTATAA TGAAAGCAGT ACTTGAAGCT GCTAAATGGT GTGATGACCC TAAGAATAGG AAAAAGCTTG CTAAAATTTT GAGCCAACAA AAATATGTAA ATGCTCCTGC AGATGCGTTA GAAAGCAGAT TGTTAGGTAT TTATGACCTT GGAATAGGGA AATATACATA TAAAGACGAT TATATGCTCT TTTATAAAAA CGGAGAAGTT CCATTTCCAA AGAAATCTTA TGGAATCTTT TTCTTAGCTC AATTTAGAAG ATGGAAAATG GTTAAAGAAC CAATCAACTA CAAGGCTGTT GTAGATACTA TTATAAAACA GGACATGTAT ATCAGTGTTG CTAATGAGAT GAAAATACCG ATACCAAAAG ATGATATGAA ACCTATTTCT GGCTTTATAG ACAACGTGAT CTTTAATCCT AATGATCCTG AAGGTTCAAT AAAAAAATAT AGCATCAAGG AGATTTAG
|
Protein sequence | MLNRRQVIKG AIGAAIVSSF SPYISRAAGK IRIGFIPLTD CATVVMAQEL GLFKKYGVDV EVVKETSWPN IRDKLLNGEL TAAHCLFSLP LSVYTGIGGP KGKVIPIAMT INFNGQGITL SNEFKGKVGF REINKVKQVV NELKSKKGEC TFAMTFPGGT HDIWLRYWLG ACGINPNRDV RVIPNPPPQM VSNMKVGRMD GFCVGEPWNA VAVKEGIGFT HITFQDIWKH HPEKALAFNN EFFEKNQGEV KAIMKAVLEA AKWCDDPKNR KKLAKILSQQ KYVNAPADAL ESRLLGIYDL GIGKYTYKDD YMLFYKNGEV PFPKKSYGIF FLAQFRRWKM VKEPINYKAV VDTIIKQDMY ISVANEMKIP IPKDDMKPIS GFIDNVIFNP NDPEGSIKKY SIKEI
|
| |