Gene SYO3AOP1_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0056 
Symbol 
ID6331787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp65484 
End bp66701 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content35% 
IMG OID642656337 
ProductNO3-/NO2-ABC transporter 
Protein accessionYP_001930259 
Protein GI188996008 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACA GAAGACAAGT AATCAAAGGA GCAATTGGTG CAGCAATTGT TTCAAGCTTT 
AGTCCTTACA TTTCAAGAGC TGCAGGGAAA ATAAGAATAG GCTTTATACC TCTTACAGAC
TGTGCAACCG TCGTCATGGC ACAAGAACTT GGATTATTCA AAAAATACGG CGTTGATGTA
GAAGTAGTAA AAGAGACAAG TTGGCCAAAT ATTAGAGATA AGCTGTTAAA CGGTGAGTTA
ACAGCTGCTC ATTGTCTGTT TAGCCTTCCT CTGTCTGTAT ATACCGGAAT AGGTGGTCCT
AAGGGTAAAG TTATTCCTAT TGCTATGACT ATTAATTTTA ATGGACAGGG CATAACTCTT
TCGAATGAAT TTAAAGGAAA AGTAGGTTTT AGAGAAATAA ATAAAGTAAA ACAAGTAGTC
AATGAATTAA AATCAAAAAA AGGTGAATGT ACTTTTGCAA TGACATTCCC GGGTGGAACT
CATGATATAT GGTTAAGATA TTGGCTTGGA GCATGCGGTA TTAATCCAAA TAGGGATGTA
AGAGTAATTC CAAACCCACC ACCGCAAATG GTTTCAAATA TGAAAGTGGG AAGAATGGAT
GGTTTTTGTG TGGGAGAGCC TTGGAATGCG GTTGCTGTTA AGGAAGGTAT AGGCTTTACT
CATATTACAT TCCAGGATAT ATGGAAACAC CATCCAGAAA AGGCTTTGGC TTTCAATAAC
GAATTTTTTG AAAAAAATCA AGGAGAAGTA AAAGCTATAA TGAAAGCAGT ACTTGAAGCT
GCTAAATGGT GTGATGACCC TAAGAATAGG AAAAAGCTTG CTAAAATTTT GAGCCAACAA
AAATATGTAA ATGCTCCTGC AGATGCGTTA GAAAGCAGAT TGTTAGGTAT TTATGACCTT
GGAATAGGGA AATATACATA TAAAGACGAT TATATGCTCT TTTATAAAAA CGGAGAAGTT
CCATTTCCAA AGAAATCTTA TGGAATCTTT TTCTTAGCTC AATTTAGAAG ATGGAAAATG
GTTAAAGAAC CAATCAACTA CAAGGCTGTT GTAGATACTA TTATAAAACA GGACATGTAT
ATCAGTGTTG CTAATGAGAT GAAAATACCG ATACCAAAAG ATGATATGAA ACCTATTTCT
GGCTTTATAG ACAACGTGAT CTTTAATCCT AATGATCCTG AAGGTTCAAT AAAAAAATAT
AGCATCAAGG AGATTTAG
 
Protein sequence
MLNRRQVIKG AIGAAIVSSF SPYISRAAGK IRIGFIPLTD CATVVMAQEL GLFKKYGVDV 
EVVKETSWPN IRDKLLNGEL TAAHCLFSLP LSVYTGIGGP KGKVIPIAMT INFNGQGITL
SNEFKGKVGF REINKVKQVV NELKSKKGEC TFAMTFPGGT HDIWLRYWLG ACGINPNRDV
RVIPNPPPQM VSNMKVGRMD GFCVGEPWNA VAVKEGIGFT HITFQDIWKH HPEKALAFNN
EFFEKNQGEV KAIMKAVLEA AKWCDDPKNR KKLAKILSQQ KYVNAPADAL ESRLLGIYDL
GIGKYTYKDD YMLFYKNGEV PFPKKSYGIF FLAQFRRWKM VKEPINYKAV VDTIIKQDMY
ISVANEMKIP IPKDDMKPIS GFIDNVIFNP NDPEGSIKKY SIKEI