Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0054 |
Symbol | |
ID | 6331785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 63941 |
End bp | 64714 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656335 |
Product | nitrate ABC transporter, ATPase subunits C and D |
Protein accession | YP_001930257 |
Protein GI | 188996006 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAT ACTTAGAAAT TATTAATGTA AGTAAATCAT TCGGAAATTT TATAGCTCTT AAAGATGTCA ATTTACTTGT AAATAAAGGT GAGTTTGTAT GCTTAATAGG ACACTCTGGA TGCGGTAAAT CAACATTACT TTCAATGGTA GCTGGACTGT TAGAACCTAC AACAGGAAGC ATTGTCTTAG ATAATAAGGA AATATCTTCC CCAGGACCCG ATAGAGCAGT TGTTTTCCAA AACTATAGTC TCTTACCATG GTTGAGTATA TGGGATAACG TAATGGTAGC TGTGAAATCT GTTTTGAAAG GTTTAAGCAA AAAAGAAATT GAGGAGAGGG TAAAACATTA TCTTAGTTTA GTCGGGGTTT ATGAACACAG ACATAAAAAA CCAGACCAGA TCTCCGGTGG TATGAAGCAG AGAGTTGCTA TAGCAAGAGC ATTAGCTGTA GAACCTAAGG TTTTGCTTTT AGATGAACCG TTTGGTGCAT TGGATGCACT GACAAAAACA GTTTTACAGG ATGAACTTTT ACGTATATGG GAAGAAAATA AGCTTACATG CCTAATGGTA ACTCACGATA TAGAGGAAGC TGTGTATCTG TCTGATAAAG TTGTTGTTCT TAGTAATGGA CCGGCTGCTA CTATCTATGA TATTGTTGAA GTTAAAATTC CAAGACTAAG ATTAAGGTCA GAGATTGTAA AGCTCCGAGA GTATATAGAA ACAAAAGAAA AGCTAATTTA CTACCTAACT TCTGTTTTAA GGAAGACAGC ATGA
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Protein sequence | MKAYLEIINV SKSFGNFIAL KDVNLLVNKG EFVCLIGHSG CGKSTLLSMV AGLLEPTTGS IVLDNKEISS PGPDRAVVFQ NYSLLPWLSI WDNVMVAVKS VLKGLSKKEI EERVKHYLSL VGVYEHRHKK PDQISGGMKQ RVAIARALAV EPKVLLLDEP FGALDALTKT VLQDELLRIW EENKLTCLMV THDIEEAVYL SDKVVVLSNG PAATIYDIVE VKIPRLRLRS EIVKLREYIE TKEKLIYYLT SVLRKTA
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