Gene SYO3AOP1_0042 details

Gene Information

• Locus tag: SYO3AOP1_0042
• ID: 6331770
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 51078
• End bp: 51617
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642656320
• Product: protein of unknown function DUF882
• Protein accession: YP_001930245
• Protein GI: 188995994
• COG category: [S] Function unknown
• COG ID: [COG3108] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.004948
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGAA GAGATTTTTT AAAATTCGGC TTAATTACAG GTTTTTGTGT ACTGGTTCCA 
AAATCCTTTG GTAGTATTGT TAATAGTTAC TTCCAAGCAA GAATTCTTTA TTTTTATAAT 
ACACATACAG GAGAATTTTT AAAAGAGATA TTTTACGAAA ATGGAAGGTA CAATGAAGAA 
GGTTTAAAGA ATATTTTTTA TATTTTAAGG GATTTTAGAA CTAATGAAAT TGCTGAAATT 
GATATAAAAT TAATAGATAC ACTTTACATA TTAACAAAAA CTTTAGAAGT AAACAATAGA 
CCCATAAATA TCATTTCTGG GTATAGATCT CCAAAAACAA ACAATCTTTT GAGAGAATTA 
AGTTCAGGGG TTGCAAAAAA TAGCTTGCAC ATGCAAGGGA AAGCAATTGA TATAAACATT 
TCTGGAGTTC CATTACATAT TTTAAGAGAT GCGGCAATAT CCCTCAAAGC TGGTGGTGTA 
GGATATTACC TATCTTCTAA TTTTGTGCAT ATAGACACTG GAAGAATAAG ATATTGGTAA 

 

Protein sequence

MNRRDFLKFG LITGFCVLVP KSFGSIVNSY FQARILYFYN THTGEFLKEI FYENGRYNEE 
GLKNIFYILR DFRTNEIAEI DIKLIDTLYI LTKTLEVNNR PINIISGYRS PKTNNLLREL 
SSGVAKNSLH MQGKAIDINI SGVPLHILRD AAISLKAGGV GYYLSSNFVH IDTGRIRYW