Gene SYO3AOP1_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0017 
Symbol 
ID6331093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp17708 
End bp18661 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content31% 
IMG OID642656297 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_001930222 
Protein GI188995971 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.692068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAG TATTTTACAG AGAAGGCTTA ATAATAAAGT CAATCCAGCT TAAAGAACTT 
GAAAAAATAG AGGATAAGTC TAACATCTTA TGGGTTGATA TCTTCAATCC AACGGAAGAA
GAAATAAAAT GGTCTGTAGA AACTTTTAAG ATTGAATTTC CATCATTCCA AGAAAGGGAA
GATATAGAGA TAAGTTCAAG ATATTGGGAA GAGGAAGACA GCATAACGAT TAACACATAC
TTTTTAATCA GAGAAGAAGA GAACGCATTT AACGATACTG TCTCTTTTAT CATAAAAGAC
AATTACATCA TCACTGTAAG ATACAGAGAG TTAAAGACAT TCAGAGAATT TGTAAGAAGA
TTACTTACCA ACCCAAGCAT CTATAAAACA GGATTTCATG TTTTCTCTTC TATTCTTGAA
ATCAAGATTG CATCAGATTC CGACGTTCTT GAAAATGTAT CAAAAGAGAT TTCAAAGCTT
GGAAAAATCG TATCTTCCGG AAACTTAGAT GTTACAGAAA CAGTTTTTGA ATCTATCTCT
TACTACGAAG ATTTAAACAT GACTATCAGG GAATCCCTTA TAGATAAGCA AAGGGTTTTA
TCTTCATTAC TAAAAAGCTA TAAAGTTCCT GAAGATGTTA GAGAAGAGCT AAGAATTTTG
ATCAAAGACG TAAACTCTCT AATTGATTAT ACAAAGTTTA ATTTTGAAAG ACTAAGCTAT
TTACAAAATA CATTCTTAGG TTTGTTAAAC ATAGAGCAGA ACAAAGTAAT CAAAATCTTT
ACAGTTATAG CTACTATCTT TATTCCACCT ACATTGATTG CAAGCATTTA TGGTATGAAC
TTTGAAAATA TGCCAGAATT ACATTGGCAG TATGGATATT TTTATGCCTT AATTCTCATG
TTTTTGTCAG CATCTGTTCC AATTTTCTTA TTTAAAAGGA AAGGGTGGCT ATGA
 
Protein sequence
MIRVFYREGL IIKSIQLKEL EKIEDKSNIL WVDIFNPTEE EIKWSVETFK IEFPSFQERE 
DIEISSRYWE EEDSITINTY FLIREEENAF NDTVSFIIKD NYIITVRYRE LKTFREFVRR
LLTNPSIYKT GFHVFSSILE IKIASDSDVL ENVSKEISKL GKIVSSGNLD VTETVFESIS
YYEDLNMTIR ESLIDKQRVL SSLLKSYKVP EDVREELRIL IKDVNSLIDY TKFNFERLSY
LQNTFLGLLN IEQNKVIKIF TVIATIFIPP TLIASIYGMN FENMPELHWQ YGYFYALILM
FLSASVPIFL FKRKGWL