Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0014 |
Symbol | |
ID | 6331952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 15961 |
End bp | 16839 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656294 |
Product | ROK family protein |
Protein accession | YP_001930219 |
Protein GI | 188995968 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCTTG GAATTGATAT TGGTGGGACT TTTATAAAGG TTGTTGGTAA AGATGAGAAT AATAACATTT TTAAAGAGAA AATTAGCGTT AATTTTCAGG ATAAAAAAAC TTTTGTAAGT GAAATACTTA AATTAATAGA AAAACACAAA GCTTTAAAAG TTGGTATAGC CATTGCCGGA CTTGTTGATA AAAAATCCGG TCAGCTTACA AACTCACCAA ATCTAAAGTT TTTAGAAGGT TTGAATTTAA AGCAGGAGAT AGAAAATCAC AGTAATATCA AAGTGTTTAT AGAGAATGAT GCAAATCTTG CTGCTTATGG TGAGTATGTT TACGGAAATG GCAAAGATAG CGAAATTCTT GTCTGCTTGA CCCTTGGAAC CGGTCTTGGT GGTGGTGCTG TAATTGGTGG TAAAATCATC TCCGGCGTCT CGGGTAGTGC TATGGAGATA GGTCATATTG CTGTTGAAAA AAATGGACTA CCATGCCACT GTGGAAGAAA TGGTTGTTTA GAAGCTTATG TGTCTTCCTA CGGACTTGAA AGGATATACT GTATGCTTAC AGAAAAAAAG ACAACATCTT TTGAGATAGT TAATCTTGCT AAGAACAAAG ATGAAAAAGC TTTAAAATCT TTTGAGATGT TTAGTAATTA CTTATCAACC GGTATTATGA ATATTGCTCA TATATTTAAT CCTGACAAAA TACTGCTGGC GGGCGGCATT ATAGAACATT ATCCTGATAT TTTAGAGATT GTTAGAGAAA AAACAAAAAA TCTTATTTTT CCATTACCAC TTAGAGATTT AAAAATTGAT ATGGCAAAGC TTGGAAGTTG GAGTGGTGCT TTTGGTGCAT TAGCTTTTGC GGAAGGTCAT TCTTCGTAG
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Protein sequence | MILGIDIGGT FIKVVGKDEN NNIFKEKISV NFQDKKTFVS EILKLIEKHK ALKVGIAIAG LVDKKSGQLT NSPNLKFLEG LNLKQEIENH SNIKVFIEND ANLAAYGEYV YGNGKDSEIL VCLTLGTGLG GGAVIGGKII SGVSGSAMEI GHIAVEKNGL PCHCGRNGCL EAYVSSYGLE RIYCMLTEKK TTSFEIVNLA KNKDEKALKS FEMFSNYLST GIMNIAHIFN PDKILLAGGI IEHYPDILEI VREKTKNLIF PLPLRDLKID MAKLGSWSGA FGALAFAEGH SS
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