| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5402 |
|---|
| Symbol | |
|---|
| ID | 6313950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5778841 |
|---|
| End bp | 5780337 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642654084 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001928029 |
|---|
| Protein GI | 188584584 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC TCTTCCCCTT CGACAACAGC TTCGCGCGCC TGCCGGACCG CTTTTTTGCG
CGGGTGGCGC CCACGGCGGT CGAGGCGCCG CGGCTGGTGC GGCTGAACCG GACACTTGCC
CTCGATCTCG GCCTCGATCC GGATCGGCTC GAAAGCCCTG AGGGCCTCGA CGTCCTGTCC
GGGCGGCGCG TTGCGGAAGG CGCGGAGCCG CTGGCTGCGG CCTATGCCGG GCATCAGTTC
GGGCAGTTCG TGCCGCAACT CGGCGACGGG CGGGCCATTC TGCTCGGCGA GGTCGTCGGC
CGTGACGGGC GCCGCCGCGA CATCCAGCTC AAGGGCTCCG GTCCGACCCC GTTCTCCCGC
CGAGGCGACG GGCGCGCCGC CCTCGGGCCG GTGCTGCGCG AATATCTCGT CAGCGAGGCG
ATGCATGCGC TCGGCATCCC CACCACCCGC GCACTCGCCG CCGTGACGAC CGGCGAGCCG
GTGATCCGCG AAACCGTGCT GCCCGGCGCC GTGCTGACCC GGGTCGCGTC GAGCCACATC
CGGGTCGGCT CGTTCCAGTT CTTCGCCGCC CGCGGCGACG TCGAAGGGCT GCGTGCCCTC
GCCGACCACG CGATCGCCCG TCATGATCCG GAGGCGGCGG AAGCCGAAAA CCCCTATCGC
GCGCTGCTCG AAGGCGTGAT CCGCCGCCAA GCCGAGCTGG TGGCCCGTTG GCTCGGCATC
GGCTTCATCC ACGGAGTGAT GAACACCGAC AACATGTCGA TTGCCGGCGA GACCATCGAT
TACGGCCCCT GCGCCTTCCT CGATGCTTAC GATCCGGCGA CCGCCTTCAG CTCCATCGAC
CGGCATGGGC GCTACGCCTA CGGCAATCAG CCGCGCATCG CGCTGTGGAA TCTGACGCGG
CTCGCCGAAG CCCTGCTGCC GCTCCTGTCG GAGGACGAGA CCAAGGCCGT CGCGGAGGCC
GAGGCAGCCC TGACGGGTTT CGCCGGGCTG TTCGAGGCGG CCTATCACGG TCTCCTCAAC
CGCAAGCTCG GCCTCACCAC CATGCGCGAC GGCGACCCGG CCCTGGCCGG CGACCTCCTG
AAAACCATGG CCGAGAACGG GGCCGACTTC ACCCTCACCT TCCGCCGTCT GAGCGCGGCC
GCGCCGGGGT CCGGGCCTGC GCCGGAGCCC GAAGCGGTCG AGGCCGTGCG AAGCCTGTTT
ATCGATCCGA CCAGCTTCGA TGCCTGGGCC GAACGCTGGC GGCGCCGGCT CGACGAGGAG
CCCGGTTCAG CCGCCGGGCG AAAGGCGCTG ATGCGGTCGG TCAATCCCGC CTTCATTCCG
CGCAATCACC GCGTCGAGGC GATGATCGAG GCCGCCGTCG AGCGGCAGGA TTTCGTGCCG
TTCGAAACGC TTCTGACCGT CCTCTCCCGC CCCTATGACG ACCAGCCCGA CTTCGCCCAG
TTTGCCGAAG CGCCGGAAGG CGGCGGCCGC GGTTACCGCA CGTTCTGCGG AACATAA
|
|---|
| Protein sequence | MTALFPFDNS FARLPDRFFA RVAPTAVEAP RLVRLNRTLA LDLGLDPDRL ESPEGLDVLS
GRRVAEGAEP LAAAYAGHQF GQFVPQLGDG RAILLGEVVG RDGRRRDIQL KGSGPTPFSR
RGDGRAALGP VLREYLVSEA MHALGIPTTR ALAAVTTGEP VIRETVLPGA VLTRVASSHI
RVGSFQFFAA RGDVEGLRAL ADHAIARHDP EAAEAENPYR ALLEGVIRRQ AELVARWLGI
GFIHGVMNTD NMSIAGETID YGPCAFLDAY DPATAFSSID RHGRYAYGNQ PRIALWNLTR
LAEALLPLLS EDETKAVAEA EAALTGFAGL FEAAYHGLLN RKLGLTTMRD GDPALAGDLL
KTMAENGADF TLTFRRLSAA APGSGPAPEP EAVEAVRSLF IDPTSFDAWA ERWRRRLDEE
PGSAAGRKAL MRSVNPAFIP RNHRVEAMIE AAVERQDFVP FETLLTVLSR PYDDQPDFAQ
FAEAPEGGGR GYRTFCGT
|
|---|
| |