Gene Mpop_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5388 
Symbol 
ID6313064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5764428 
End bp5765447 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID642654069 
Producttol-pal system protein YbgF 
Protein accessionYP_001928015 
Protein GI188584570 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.986897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCC GCCTCCTCCT GAGCCTCGCC CTCTCGGTCT CGCCGGCCGC GTTCTGCACC 
GCGCAGGCGC AGGACGCATC CGAACTTGTG GTGCGGCTCA ACCGCCTCGA AAACGTCTCC
CGGCAACTCT CCGGACAGAT CGAGACGCTG CAATACGAGA ACCGGCAGCT CAAGGAACAG
CTTCGGAAGT TCCAGGAGGA TGTCGAGTTC CGCTTCCAGG AAGGGAAGGG GAGCGCGGCG
CCGCCTGCTC GGAAGGCGCC GGCTCCCGCC GCCTCGCCAC CCTCGGCCGC GCCTTACGGC
ACCAATCCCG GCGAGGGGCG GCCCGGCAAG CGCAGCGACG CGTTCGACCC CGAGCAGAAC
CCGACCGCGC CCGGCGCGCC GAAGCCGCTC GGCACAACGC AGCCATCGCT GCCCCTGCCG
ACCGGCGCCC TCGCCGAGGC CGAGACGCCG CTGCGCCGCT CCGTTCCTCC GACGGTGGCT
GAGGCCGATG CGGGCCCGTC CGACGACATG GACCTGCCGC CGCCCGGCCT CGGCGGACCG
GTGGACCTCT CGCCGCCCCC AGCGCGCACT GGCTCGATCG GGCTGGTCGA GACGCCCGCC
GCCGGCGCCA GCATCGCCGC CACCGGCAGC GGCGATGCGC AAGCGGATTT CGAGGCAGCC
TACGCACTGA TCCGCGAGCG CCAGTACGAG CAGGCCGAGA TGAGCCTGCG CCAGTTCATC
CAGTCGCATC CCCGCGACCG GCTGGTGCCG AAGGCGACCT TCTGGCTCGG TGAAAGCTAC
CTCCAGCGCA ATCGCTCGCG CGAGGCGGCC GAGCAATTTC TGAAGGTGTC CACCGACTTC
GCCAACTCGC CGGTGGCCCC CGAGGCGATG CTGAAGCTCG GCGCCTCGCT GCACGCGCTC
GGCGCCAAGG CTCAGGCCTG CGCCACCCTG GCCGAGGTCG AGCGGAAGTT TCCGAGCGCC
GGCACGAGCG TCCGCCAGGG CGTCGAGCGG GAGCAGAAGC GCGCCCGCTG CGCTGCTTGA
 
Protein sequence
MLRRLLLSLA LSVSPAAFCT AQAQDASELV VRLNRLENVS RQLSGQIETL QYENRQLKEQ 
LRKFQEDVEF RFQEGKGSAA PPARKAPAPA ASPPSAAPYG TNPGEGRPGK RSDAFDPEQN
PTAPGAPKPL GTTQPSLPLP TGALAEAETP LRRSVPPTVA EADAGPSDDM DLPPPGLGGP
VDLSPPPART GSIGLVETPA AGASIAATGS GDAQADFEAA YALIRERQYE QAEMSLRQFI
QSHPRDRLVP KATFWLGESY LQRNRSREAA EQFLKVSTDF ANSPVAPEAM LKLGASLHAL
GAKAQACATL AEVERKFPSA GTSVRQGVER EQKRARCAA