| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5337 |
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| Symbol | |
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| ID | 6312986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5707661 |
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| End bp | 5709826 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642654019 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001927965 |
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| Protein GI | 188584520 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.759699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCC GGATCCCCGA TTTCGCCACC GTCGCCTACG CGGCCGACGG CTTCAAGGCG
CCGCCTCCGC CGGCCGGGGA GCCGTGGATG ACGCCCGAGG GCATTCCGGT GAAGGGCTTC
TACGGCCCCG AGGATCGCGA GGGCTGCGAG GGGATCGACT CGTTCCCTGG CCTGCCGCCC
TACCTGCGCG GGCCCTATCC GGCGATGTAC GTCACCCAGC CCTGGACCAT CCGGCAATAT
GCCGGCTTCT CCACGGCGGA AGATTCGAAC GCCTTCTACC GGCGCAACCT CGCGGCGGGC
CAGAAGGGCC TCTCGGTCGC CTTCGACCTC GCGACCCACC GCGGCTACGA TTCGGACCAT
CCGCGCGTCT CGGGCGATGT CGGCATGGCG GGTGTCGCGA TCGACTCGAT CTACGACATG
CGCACGCTGT TCTCGGGGAT TCCCCTCGAC CAGATGACCG TGTCGATGAC GATGAACGGC
GCGGTGCTGC CCGTGCTCGC CCTCTACATC GTCGCCGCCG AGGAGCAGGG CGTGCCGCCG
GAAAAACTCG CCGGCACGAT CCAGAACGAC ATCCTGAAAG AGTTCATGGT CCGCAACACC
TACATCTATC CCCCCAAGGG ATCGATGCGG ATCATCTCCG ACATCTTCGG CTACACCTCG
AAGAACATGC CGAAGTTCAA CTCGATCTCC ATCTCCGGCT ACCACATGCA GGAAGCCGGG
GCGACACAGG ATCTCGAACT CGCCTACACG CTCGCGGATG GCGTCGAGTA CATCAAGGCG
GGTCTCGCGG CCGGTCTGAC CATCGACCAG TTCGCCCCGC GCCTGTCGTT CTTCTGGGCG
ATCGGGATGA ACTTCTTCAT GGAGATCGCC AAGATGCGGG CCGCGCGCCT GATCTGGGCC
AAGCTCGTCA AGGAGTTCGA GCCGAAATCC GACAAGTCGC TGCCGCTGCG CACCCACTCG
CAGACGTCCG GCTGGTCGCT GACCGCGCAA GACGTGTTCA ACAACGTCAC CCGCACCTGC
ATCGAGGCGA TGGCGGCGAC CCAGGGCGGG ACGCAATCGC TCCACACCAA CGCGCTCGAC
GAAGCTCTGG CCCTGCCGAC CGACTTCTCG GCCCGCATCG CCCGCAACAC CCAGCTCTTC
CTGCAGCAGG AGAGCGGCAC CACGCGCATC ATCGATCCGT GGGGCGGCTC CTACTACGTC
GAGCGGCTGA CCCACGACAT CGCCGCGCGG GCCTGGGAGC ATATCCGCGA GGTCGAGGCG
CTCGGCGGCA TGGCGAAAGC CATCGAGGCG GGCATCCCGA AGCTGCGCAT CGAGGAAGCC
GCGGCGCGCG CCCAGGCGCG GATCGATTCC GGCCGGCAGA CGATCGTCGG CATCAACAAG
TACAAGCCCG ACGACGAGAT GAAGATCGAC CTGCTGCGCG TCGACAACGC CGATGTGCGC
GCCAAGCAGA TCGACAAGCT CAAGCGCCTG CGCGCCGAGC GCAACCAAGC CGACGTCGAT
GCGGCGCTGG CCGCCCTGAC GAAGGCCGCC GACGGCGAGG GCAACCTGCT CGAACTGGCG
GTGAACGCGG CGCGGGCCAA GGCCACGGTC GGCGAGATCT CGGAGGCGCT GGAGAAGGCC
TGGGGCCGTC ACCGCGCCGA GATCCGCTCG ATCTCGGGCG TCTATAAGCG GGAGGTGGGC
GGCATGTCGC CGGTGGTGGA GAAGGTCCGC GGCCTCGTCG AGGCCTTCGA GGAGAACGAC
GGGCGCCGCC CGCGCATCCT GGTCGCCAAG ATGGGCCAGG ATGGGCACGA CCGCGGCCAG
AAGGTGATCG CCTCGGCCTT CGCCGATCTC GGCTTCGACG TCGATATCGG ACCGCTCTTC
GCCACGCCCG ACGAGGCGGC ACGCCAAGCG GTGGAGAACG ACGTGCACAT CGTCGGCGTC
TCCTCGCTCG CGGCGGGCCA CCTGACCCTC GTGCCGGAAC TGAAGGCCGC GCTGAAGGCG
GAGGGCCGCG ACGACGTGAT GATCGTGGTC GGCGGCGTGA TCCCGCCGGG CGATTACGAC
GCGCTCTACG CCGCGGGCGC CTCGGCGATC TTCCCGCCGG GCACCGTGAT CGCGGAGGCG
GCGGTGAAGC TGCTCGGCGA ACTCAACGGG CGCCTCGGCT ACGGCGAGCG TCAGGCGGCC
GAGTAG
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| Protein sequence | MSSRIPDFAT VAYAADGFKA PPPPAGEPWM TPEGIPVKGF YGPEDREGCE GIDSFPGLPP
YLRGPYPAMY VTQPWTIRQY AGFSTAEDSN AFYRRNLAAG QKGLSVAFDL ATHRGYDSDH
PRVSGDVGMA GVAIDSIYDM RTLFSGIPLD QMTVSMTMNG AVLPVLALYI VAAEEQGVPP
EKLAGTIQND ILKEFMVRNT YIYPPKGSMR IISDIFGYTS KNMPKFNSIS ISGYHMQEAG
ATQDLELAYT LADGVEYIKA GLAAGLTIDQ FAPRLSFFWA IGMNFFMEIA KMRAARLIWA
KLVKEFEPKS DKSLPLRTHS QTSGWSLTAQ DVFNNVTRTC IEAMAATQGG TQSLHTNALD
EALALPTDFS ARIARNTQLF LQQESGTTRI IDPWGGSYYV ERLTHDIAAR AWEHIREVEA
LGGMAKAIEA GIPKLRIEEA AARAQARIDS GRQTIVGINK YKPDDEMKID LLRVDNADVR
AKQIDKLKRL RAERNQADVD AALAALTKAA DGEGNLLELA VNAARAKATV GEISEALEKA
WGRHRAEIRS ISGVYKREVG GMSPVVEKVR GLVEAFEEND GRRPRILVAK MGQDGHDRGQ
KVIASAFADL GFDVDIGPLF ATPDEAARQA VENDVHIVGV SSLAAGHLTL VPELKAALKA
EGRDDVMIVV GGVIPPGDYD ALYAAGASAI FPPGTVIAEA AVKLLGELNG RLGYGERQAA
E
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