| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5282 |
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| Symbol | |
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| ID | 6309304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5648049 |
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| End bp | 5649707 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 642653965 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_001927911 |
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| Protein GI | 188584466 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.772795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTG AGGTGCGGCG TAGCCTCGTC CTCGCGGCAG CGGGACTGCT CGGCGGCTTC
GCCATGGTGG TCGCGCTGTT CGGGACCGGG GAGCTTCTCA AGCGCAACGC GGCGGTCAAC
CCTTCTGCCG AAACACCGGC CGCGCCGGAC ACGCCTTCGG CCGGGGCGGA GACCGGCGAC
CGTGCAGGCG GGGCGCCCTC GACGGACTCT CCTCATGCCG CCCTCCAGGC CCTATCGCAA
GGGGAAACCG GACAGGCTAC GCCGTCCACG CCCGAGGCGA AGCCGCGCGC GGACGATGGC
ACGCCGAGCT TCGACATCGT GCGCGTCGAG CCCGACGGGG CGAGCGTGAT CGCCGGCCGT
GCGGCGCCGA ACAGCCGCAT CGACCTGCTG CGCGACGGCA AGCCCTTCGC CACCGCCACG
GCCGACGCCG CCGGTCAGTT CGCCCTGACG CCGCCGGACC TGCCGCCGGG CACGAGCGAG
ATCGCCCTGC GCGCCACCGG ACCCGACGGC AAGCCGCTGC CGGGACGCGA GAGCGTGACC
GTCGTGGTCG CCGAGAAGCG GGACGCCAAG CCGCTAATCG CCCTGACTGC CCCCGACCTG
CCGACCCGGG TGCTGTCCCA GCCCGACGCG CCCGGCGCCG CCGGCAAGCC GCCGACGACC
GCCTTGGCCG GGACACCCGG CGCGCCCGCG TCGAGCGAGG GAAATCGGCC GGCGGCGGCC
AAGCCGGGCC GGGATGCGGA GAAGCCGGCC GGCAAGGGTG AGGCGGGAGC GATCCGCATC
GTCAGCGTGG ACGCGCAGGA GGGCGGGCGC CTGCACGTCA CCGGTCAGGC GACGGCGTGG
AGCAGCCTGC GCCTCTACCT CAACGATACC ATGGTGGCCT CGGGGCAATC CGGCGCCGAC
GGCCGCGTGG CCTTCACGAT CGGGCGCGGG GTGAAACCGG GCGCCTACCG CATCCGCGTC
GATTCCGTCG ATCCGGCGGC CGGCAAGGTG AGGGCGCGCG CCGAGGTCGC CTTCGCCTAT
CCCGACAGCG TGCCGCCGAC TCGCTACGCC GACGCCACCG CGACCGGGAA GGCCGGATCG
GGTGAGGCGA CGAAGCCCGC CGGGGCGAGT CGGGATCGGG CTGCGGCCGA GCCGCGCGCC
ACCCCGCCGG GCCCGTCCGA GGCGGGCCGC ACCGCGCAAA TGGCGGCCAG GACCGCACCG
GCGGAGACCA AGCCGGCCGA GACGCGCGCC GCACCGAGTC TCGCGGCGCC CCCGCCCGAC
GCGAATGCCG CGACTTCCGG AGCGGATCGC CCCGCCGCGT CCGGAACGCC GTCGCCGGCC
GCCTCGTCGG GTGCGGCGAC GGGCGCGGAT CGGAGGGCTG CCGCCGCGGT TGCGCCGGGC
CCTCCGGGCG GCGGTGCCGC GCCCGGCGAG GCCGGAACCG TCTTCGTTCC GGAGGTCAGC
ACCGCCCGGA TCACCCGCGG CGACAGCCTG TGGCAGATCA GCCGGCGCAC CTACGGCCGC
GGCAATCGCT ACACCGTGAT CTACGACGCC AACCAGGACC AGATCCGCGA CCCGAACCGG
ATCTATCCGG GTCAGATGTT CGTGCTGCCG AAGGAGGGAT CCGCGCCGGG CACGCCGTCG
ACGCCGTCGG CCAGGAGCGG TTCGGACCGC CGGACCTGA
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| Protein sequence | MTAEVRRSLV LAAAGLLGGF AMVVALFGTG ELLKRNAAVN PSAETPAAPD TPSAGAETGD
RAGGAPSTDS PHAALQALSQ GETGQATPST PEAKPRADDG TPSFDIVRVE PDGASVIAGR
AAPNSRIDLL RDGKPFATAT ADAAGQFALT PPDLPPGTSE IALRATGPDG KPLPGRESVT
VVVAEKRDAK PLIALTAPDL PTRVLSQPDA PGAAGKPPTT ALAGTPGAPA SSEGNRPAAA
KPGRDAEKPA GKGEAGAIRI VSVDAQEGGR LHVTGQATAW SSLRLYLNDT MVASGQSGAD
GRVAFTIGRG VKPGAYRIRV DSVDPAAGKV RARAEVAFAY PDSVPPTRYA DATATGKAGS
GEATKPAGAS RDRAAAEPRA TPPGPSEAGR TAQMAARTAP AETKPAETRA APSLAAPPPD
ANAATSGADR PAASGTPSPA ASSGAATGAD RRAAAAVAPG PPGGGAAPGE AGTVFVPEVS
TARITRGDSL WQISRRTYGR GNRYTVIYDA NQDQIRDPNR IYPGQMFVLP KEGSAPGTPS
TPSARSGSDR RT
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