Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5239 |
Symbol | |
ID | 6309247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 5608860 |
End bp | 5610326 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642653920 |
Product | type I secretion outer membrane protein, TolC family |
Protein accession | YP_001927868 |
Protein GI | 188584423 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACC GGAGCGGACA CGGCGGTGCG GCGGGACGGC AAATCGAGAA ACCGCAAGGG CTGATCGACG TGAAAGAACG GAACCCTGCG GCGCGGTCTG CGCTTCGGCT GGCTGGTGCC GTCGCAACGG CGCTGGCTGT CGCAAGTCCG GCCGCCGCCG AGACCCTCGA GAGCGCGTTG TCCCGCGCCT ATCAGGCGAA CCCGGCGCTG AACGCGGCGC GGGCGAACCT GCGCGCGACG GACGAGGACG TGAACCGCTT CCAGGCCGGC TACCGCCCCA ACGCCGCGCT CTCCGCCGAT ATCGGCGTCC AGCAGTTCCA GGGCTCGATC GCCGGCTCGC AATTGTCCGG TCGGCGGGGG CTGACGGTGC CGAGCGGCGC GGGCCTCACC ATCAACCAGA ATGTCTTCGA CGGCTTTCAG ACGGACAACC GCGTCCGCTC GGCCGAATCG ACCGTGCTCG GTACGCGCGA GGGCCTGCGC CTCACCGAGA TGAACACCCT GTTCAACGCG GCCCAGGCCT ATATGAACGT TCTGAGCGAC ACCGCGACGC TCGAACTGCA GCGCAACAAC GTCGAGGTGC TCGAAGAGCA GCTCCGCCAG ACCCGCGACC GCTTCAACGT CGGCGAGGTG ACCCGCACGG ACGTGGCGCA GGCGGAAGCG CGCCTCGCCG GTGCCCGCTC GCAGGTCAGC GCGGCGGAAG CCGCGCTGCG CGCCTCGATC GGCATCTTCC GCCAGATCGT CGGCGTCGAG CCGCGCCAGC TCGCCCCGGG CCGCCCGCTC GACCGCTACG TGCCGACCTC GCTCGATCAG GCGATCCTGA TCGGCCTGAA GGAGCATCCG CAGATCCTGT CCTCGCTGCA CGCCGTCGAC GTGGCGGAAC TGCAGGTGAA GATCGCCGAG GGCGCGCTCT ATCCCCAGGC GCAGGTCACC GGCGCGGTGC AGCAGCGCTA CGATCAGCAG TTCCCCGGCG ACAACGGCGT CACCGCCTCG ATCGTCGGCC GGGTCAACAT CCCGCTCTAC CAGGGCGGCG GCGAGTATGC CGCGATCCGG CAGGCCAAGG AGAATGTCGG GCGCGCCCGC CTCGTGGCCG ATCAGGATCG CGACACGATC CGCGCCTCGA TCGTGCGGAC CTGGGGCAAC CTCGAAGCCT CGAAGGCGCA GGTGATCGCC TCGCAGGCGC AGGTCCAGGC CAACGAGGTG GCGCTCAACG GCGTGCGCGA AGAGGCGCGC GTCGGCCAGC GCACCACCCT CGACGTGCTG AACGCGCAGC AGGAACTGCT CTCCGCCCGC GTCGCCCTGA TCCGCGCCCA GCGCGACCGG GTGGTGAATT CCTACGACGT GGTCCAGGCG GTCGGCCGGC TCACGGTCCG CTTCACCAGC CTGCCGGTGA CGCCCTACTC AGCCCGCGAG CACCTCGATC AGGTGCGCGA TCTCTGGTTC GGCGTGCGCA CGCCTGACGG GCGCTGA
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Protein sequence | MTNRSGHGGA AGRQIEKPQG LIDVKERNPA ARSALRLAGA VATALAVASP AAAETLESAL SRAYQANPAL NAARANLRAT DEDVNRFQAG YRPNAALSAD IGVQQFQGSI AGSQLSGRRG LTVPSGAGLT INQNVFDGFQ TDNRVRSAES TVLGTREGLR LTEMNTLFNA AQAYMNVLSD TATLELQRNN VEVLEEQLRQ TRDRFNVGEV TRTDVAQAEA RLAGARSQVS AAEAALRASI GIFRQIVGVE PRQLAPGRPL DRYVPTSLDQ AILIGLKEHP QILSSLHAVD VAELQVKIAE GALYPQAQVT GAVQQRYDQQ FPGDNGVTAS IVGRVNIPLY QGGGEYAAIR QAKENVGRAR LVADQDRDTI RASIVRTWGN LEASKAQVIA SQAQVQANEV ALNGVREEAR VGQRTTLDVL NAQQELLSAR VALIRAQRDR VVNSYDVVQA VGRLTVRFTS LPVTPYSARE HLDQVRDLWF GVRTPDGR
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