| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5237 |
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| Symbol | |
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| ID | 6309245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5605260 |
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| End bp | 5607980 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642653918 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001927866 |
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| Protein GI | 188584421 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA AGACCTTCAA CCCCGCCGCC GTCGAGGCGC GCGTCTCCGC GGCCTGGGAA
GAGGGCGAGG CCTTCCGCGC CGGCCGCCCC GAGCGCGCCG GCGCCGAGCC GTTCAGCATC
GTGATCCCGC CGCCGAACGT GACGGGATCG CTGCATATGG GCCACGCGCT CAACAACACG
ATCCAGGACA TCCTCGTCCG CTTCGAGCGG ATGCGCGGCC GCGACGTGCT GTGGCAGCCG
GGCACGGACC ATGCCGGCAT CGCCACGCAG ATGGTGGTCG AGCGCAAGCT CATGGAGACC
CAGCAGCCCG GCCGGCGCGA GCTGGGCCGC GAGGAGTTCC TGCGCCGCGT CTGGGCCTGG
AAGGAGGAAT CCGGCGGCAC GATCATCGGC CAGCTCAAGC GGCTCGGTGC CTCCTGCGAC
TGGTCGCGGG AGCGCTTCAC CATGGACGAG GGCCTGAGCC GCGCCGTGCT CAAGACCTTC
GTCGATCTGC ACGCGCAGGG ACTGATCTAC CGCGACAAGC GCCTCGTGAA CTGGGATCCG
AAGTTCCAGA CCGCGATCTC GGACCTCGAA GTCCAGCAGA TCGAGGTGAA GGGGAAACTC
TGGCACTTCG ACTATCCGGT CGTGGACGAG GCCGGCGCCG AGACGGGCGC GGTCATCACG
GTGGCGACCA CACGCCCCGA GACGATGCTC GGCGACACGG CGGTCGCGGT CCATCCGGAC
GACGAGCGCT ACCGCGACCT CGTCGGCCAG CGCGTGCGCC TGCCGCTGGT CAACCGGCTG
ATCCCGATCG TCGCCGATGC CTATTCCGAT CCGGAGAAGG GCACCGGTGC GGTCAAGATC
ACCCCAGCCC ACGACTTCAA CGACTTCGAG GTCGGGCGCC GCAACGGCTG CCGGCCGATC
AACGTGCTCG ATCCGGAAGC GCGGATCCAG ATCGCCGGCA ATGCCGATTT CCTGAAGGGC
GCCGCGCCGG AGGCGGCGGC GCTGGCGCTC GACGGCCTCG ACCGGTTCGA GGCGCGCAAG
GCGGTCGTCG CCCTGATGGA GGAGCGCGGC AGGCTGCGCT TGGTCGAGCC CAACACCCAT
GCGGTGCCGC ATGGCGACCG CTCGGGCGTG GTGATCGAGC CCTATCTCAC CGACCAGTGG
TACGTGAACG TGAAGCCGCT GGCCGAGCGC GCCCTTCAGG CAGTGCGCGA CGGCAAGACC
CGCTTCGTCC CGGACAACTA CGAAAAGATC TTCTTCCAGT GGCTGGAGAA CATCGAGCCG
TGGTGCGTCT CGCGCCAGCT CTGGTGGGGC CACCAGATCC CGGTTTGGTA CGACGGCGGG
GGCGGCATCT TCGTCGCCGA AAGCGAGGCG GAGGCCCTTG CCCAGGCGAA GGCCAAGCAC
GGCGCCGACG TCGCCCTGAC CCGCGACCCC GACGTCCTCG ACACGTGGTT CTCCTCCGCG
CTCTGGCCGT TCTCGACGCT GGGCTGGCCG GACAAGACGC CGGAGCTGGC CCGCTTCTAC
CCCACCAACA CCCTGGTGAC GGGCAAGGAC ATCATCTTCT TCTGGGTCGC CCGGATGATG
ATGATGGGCC TGCACCTCAC CGATCAGGCC CCCTTCGACA CGGTCTACCT GCACACCCTC
GTCCGCGACG AGAAGGGTGC GAAGATGTCG AAGTCGAAGG GCAACGTGGT CGATCCGGTG
GATCTGATCG ACCGCTTCGG CGCGGATGCC CTGCGCTTCA CGTTGGCCGC GCTCGCCGCG
CCGGGCCGCG ACATCAAGCT CGGGCCGCAG CGGGTCGAGG GCTACCGCAA CTTCGCGACC
AAGCTCTGGA ACGCGGCCCG GTTCGCCGAG ATGAACGGCT GCGAACTCAA GGCCGATTTC
CGGCCCGACG CCGTGCGCGA GACGCTCAAT GCCTGGGCGC TGACCGAGGC CGCCAAGGCG
GTGGCCGAGG TGGCGCAGGC CATCACCGTC TATCGCTTCA ACGATGCGGC CGCCGCCGCC
TACCGCTTCG TCTGGAACGT CTTCTGCGAC TGGTACCTCG AACTCGCCAA GCCCGTGCTC
CAGGGCGAGG GCGTCGATCC GGCCGCGCGC GCCGAGACGC AGGCGACGGT CGCCTTCCTG
ATCGACCAGA TCGCCAAGCT GCTGCACCCG TTCATGCCCT TCCTTACCGA GGAGCTGTGG
GCGATCAAGG GTCAGGCGCT GCCGACGTCC CGCGGCCTGC TCGCGCTCGA ATCCTGGCCG
GAGCTGTCGG CCTACCAGAA CGCCCAGGCC GAGGCCGAGA TCGGCTGGCT GGTCGATCTG
ATCTCCGAGA TCCGCTCCGC CCGCTCCGAG ACCAACGTGC CGGCCGGCGC TCAGGTGCCG
CTGGTGCTGG TCGCCGCCGA TGCGTCGGTG CGCGCCCGGG TCGAACGCTG GAGCGAGACC
CTGACCCGTC TCGCCCGGCT CTCGGAGATC GGCTGTGCCG ACATCGCGCC GAAGAACGCG
GTGCAGCTCC TCGTGCGCGG CAGCGTGGCC GCGCTGCCGC TCGAAGGCAT CGTCGATCTC
GCGGCCGAGG TCGCGCGCCT CAAGAAGGAG GCGGGCAAGG CGCGGGCCGA GATCGGCAAG
ATCGAGGGCA AGCTCGGCAA TGCCGACTTC CTCGCCCGCG CGCCGGAAGA GGTGGTGGAC
GAGCAGCGCG AGCGCCGCGA CGCGGAAGCC GCGCGGCTGG CCAAGATCGA GGAGGCGCTG
GCCCGGCTCA GCGACGCATG A
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| Protein sequence | MMDKTFNPAA VEARVSAAWE EGEAFRAGRP ERAGAEPFSI VIPPPNVTGS LHMGHALNNT
IQDILVRFER MRGRDVLWQP GTDHAGIATQ MVVERKLMET QQPGRRELGR EEFLRRVWAW
KEESGGTIIG QLKRLGASCD WSRERFTMDE GLSRAVLKTF VDLHAQGLIY RDKRLVNWDP
KFQTAISDLE VQQIEVKGKL WHFDYPVVDE AGAETGAVIT VATTRPETML GDTAVAVHPD
DERYRDLVGQ RVRLPLVNRL IPIVADAYSD PEKGTGAVKI TPAHDFNDFE VGRRNGCRPI
NVLDPEARIQ IAGNADFLKG AAPEAAALAL DGLDRFEARK AVVALMEERG RLRLVEPNTH
AVPHGDRSGV VIEPYLTDQW YVNVKPLAER ALQAVRDGKT RFVPDNYEKI FFQWLENIEP
WCVSRQLWWG HQIPVWYDGG GGIFVAESEA EALAQAKAKH GADVALTRDP DVLDTWFSSA
LWPFSTLGWP DKTPELARFY PTNTLVTGKD IIFFWVARMM MMGLHLTDQA PFDTVYLHTL
VRDEKGAKMS KSKGNVVDPV DLIDRFGADA LRFTLAALAA PGRDIKLGPQ RVEGYRNFAT
KLWNAARFAE MNGCELKADF RPDAVRETLN AWALTEAAKA VAEVAQAITV YRFNDAAAAA
YRFVWNVFCD WYLELAKPVL QGEGVDPAAR AETQATVAFL IDQIAKLLHP FMPFLTEELW
AIKGQALPTS RGLLALESWP ELSAYQNAQA EAEIGWLVDL ISEIRSARSE TNVPAGAQVP
LVLVAADASV RARVERWSET LTRLARLSEI GCADIAPKNA VQLLVRGSVA ALPLEGIVDL
AAEVARLKKE AGKARAEIGK IEGKLGNADF LARAPEEVVD EQRERRDAEA ARLAKIEEAL
ARLSDA
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