| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5124 |
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| Symbol | |
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| ID | 6312451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5486981 |
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| End bp | 5488471 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642653806 |
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| Product | protease Do |
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| Protein accession | YP_001927755 |
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| Protein GI | 188584310 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.38057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA CCGTTCGCCG CCGCGTCACC GCCTCCGTCG CTGCGGCCGC CCTCGTTGCG
GGCGGCGCAG CCGGGTTCGG CCTCACCGAA TCCGCCATGC CGGCCTACGC CCAGGCCCTG
CCCAAGACCC CGATCGAGGC TCCCGAGCAT CCGCCGGGCT CGTTTGCCAA CGTCGTCGAC
AAGGTGAAGC CGGGCGTCGT TGCCGTGAAG GTCAAGCTCG ACAGCGGCCT CGACGACGAT
GACGACGGCC CTGGCGGCCC CAACATGCAG CAGGTGCCGC CGCAACTGCG CGAGTTCTTC
AGGCGCTTCG GCCAAGGTGG TCCCGGCGGG CGCGGCATGC CGCAGCGCGG CGGGGTCGGC
TCCGGCTTCA TCATCTCGGC GGACGGCTAC GTGGTGACCA ACAACCACGT CGTCGATCAT
GCCAAGACCG TGCAGGTCAC CCTCGACGAC GGCCGGACCC TCGACGCCAA GGTCATCGGC
AAGGACCCGA AGACCGACAT CGCGCTCCTG AAGATCACCG AGAGCGGCAG CTACCCCTAC
GTCCAGTTCG GCAAGGGCGC GCCGCGGGTC GGCGACTGGG TTTTGGCTAT CGGCAACCCG
TTCGGCCTCG GCGGCACGGT CACGGCGGGC ATCGTCTCGG CCCGCGGCCG CGACATCGGT
GCCGGCCCCT ACGACGACTT CCTGCAGATC GATGCGCCGA TCAACAAGGG CAATTCCGGC
GGCCCGACCT TCAACGTCAA CGGCGAGGTC GTGGGCGTGA ACACGGCGAT CGCCTCCCCG
TCCGGCGGCT CGGTCGGCCT CGGCTTCGCG ATCCCCGCCG AGACGGTGCA GACGGTGGTC
GATCAGCTCC GCACCGACGG CAAGGTGGTG CGCGGCTATC TCGGCGTGCA GGTCCAGCCG
GTGACGAAGG ACATCGCCGA GGGGCTCGGC CTCGACAAGG CCAAGGGTGC GCTCGTCAAT
GACGCCGAGA GCGGCACGCC GGCCGCCAAG GCCGGGTTGA AGCCCGGCGA CGTGATCGAG
TCGGTCAACG GCGTCCCGAT CGACAACGCG CGCGACCTCT CGCGGTTGAT CGCCGGCCTC
AAGCCCGGCA CCGAGGTGAA GCTCACCTAT CGGCGCGGCG GCAAGAGCGA CACCGCGACC
GTCGAACTCG GTACCTTGCC GGGCGATGGC AAAGTGGTGA GCCGCGGCGA CGACGCGCCG
AGCGGTCAGG TCCGGCTCGG CCTCAGCCTG GCCCCCGCCA GCGAGGTTGG CCTCGGCGAC
GAGGGCGTGG CGGTGATGGA TGTCGATCCG ACCGGCCCGG CGGCGGCCAG GGGCATCTCG
CAAGGCGATG TGATCCTAGA TGTCGGCGGC ACCAGCGTCG CGAAGCCCTC CGATGTCCAG
GCGCAGATCC GCGCCGCGGA ATCGAGCGGC CGCAAGGCGG TGCTGATGCG GGTGAAGGGC
GCGAGGGGGC AGACCCGCTT CGTCGCCGTC GCGCTCAACA AGGAAGGATG A
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| Protein sequence | MALTVRRRVT ASVAAAALVA GGAAGFGLTE SAMPAYAQAL PKTPIEAPEH PPGSFANVVD
KVKPGVVAVK VKLDSGLDDD DDGPGGPNMQ QVPPQLREFF RRFGQGGPGG RGMPQRGGVG
SGFIISADGY VVTNNHVVDH AKTVQVTLDD GRTLDAKVIG KDPKTDIALL KITESGSYPY
VQFGKGAPRV GDWVLAIGNP FGLGGTVTAG IVSARGRDIG AGPYDDFLQI DAPINKGNSG
GPTFNVNGEV VGVNTAIASP SGGSVGLGFA IPAETVQTVV DQLRTDGKVV RGYLGVQVQP
VTKDIAEGLG LDKAKGALVN DAESGTPAAK AGLKPGDVIE SVNGVPIDNA RDLSRLIAGL
KPGTEVKLTY RRGGKSDTAT VELGTLPGDG KVVSRGDDAP SGQVRLGLSL APASEVGLGD
EGVAVMDVDP TGPAAARGIS QGDVILDVGG TSVAKPSDVQ AQIRAAESSG RKAVLMRVKG
ARGQTRFVAV ALNKEG
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