| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5077 |
|---|
| Symbol | |
|---|
| ID | 6309463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5440142 |
|---|
| End bp | 5440909 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642653759 |
|---|
| Product | LamB/YcsF family protein |
|---|
| Protein accession | YP_001927708 |
|---|
| Protein GI | 188584263 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.709601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCC GCATCGATCT CAACGCCGAT CTCGGCGAGG GTTTCGGACC CTGGCGCATG
GGCGATGACG CCGCGCTCCT CGACATCGTC ACCTCGGCCA ACGTGGCCTG CGGCTTTCAT
GCGGGCGATC CCGACATCAT GGTCGAGACG GTGCTGGCGG CGAAGGCGCG CGGCGTGGCC
GTCGGCGCCC ATCCCGGCTT CTTCGACCTG CGCGGCTTCG GCCGGAACCG GGTTCAGGAG
AGCCCGAAAC GAATCGAGCG GGACATCGCC TACCAGATCG GTGCGCTCCA GGCCTGTGCC
GCACTCGCGG GCGCCCGCGT CACCCACGTC AAGGCGCACG GGGCACTGGC CAACCTCTCC
AACGAGGACG CGGCAATCGC CGAGGCGCTG GCTCGCGCCG TGGTTGGGGT GGACCGCACT
CTGGCTCTGG TGGTGATGCC GGGGCTGCCG GCCGAGCGGG CCGGCGAGCG GGCCGGGCTC
GCCCTCGTGC GGGAGATCTA TGCCGACCGC GCCTATGCCG AGGACGGGAC GCTCGCCCCG
CGCGCGCGGC CTGATGCGGT GATCCACGAC GCAGAGGAGG CCGCCGCGCG CGTCGTCCAC
ATGGTCGAAC AACGCGCGGT GTTCACGATC AGCGGGCGGC GCATCCCCGT TGCGATCGAC
ACGGTCTGCG TCCACGGCGA CAACCCGCAG GCTCTCGCGA TGGCCGGAAC GGTGCGGGCC
GGGTTGGAAC GGGCGGGCTT TACGCTGCGC CCCTTCTCCG AGCCTTGA
|
|---|
| Protein sequence | MSTRIDLNAD LGEGFGPWRM GDDAALLDIV TSANVACGFH AGDPDIMVET VLAAKARGVA
VGAHPGFFDL RGFGRNRVQE SPKRIERDIA YQIGALQACA ALAGARVTHV KAHGALANLS
NEDAAIAEAL ARAVVGVDRT LALVVMPGLP AERAGERAGL ALVREIYADR AYAEDGTLAP
RARPDAVIHD AEEAAARVVH MVEQRAVFTI SGRRIPVAID TVCVHGDNPQ ALAMAGTVRA
GLERAGFTLR PFSEP
|
|---|
| |